Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_2560 |
Symbol | |
ID | 8391886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 2591973 |
End bp | 2593769 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644980523 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_003138259 |
Protein GI | 257060371 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.699374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCTTGT CCCAAATGCT ATTTGTCACC CTGCGAGAAG ATCCCGCCGA AGCGGAAATT CCGAGTCATA AGCTACTATT ACGCGCTGGC TATATCCGTC GTATTGGTAG CGGAATTTAC GCTTATTTAC CCCTTATGTG GCGAGTTTTG CAGAAAGTAT CGCAAATAGT CCGCGAAGAA ATGAACGCAG CCGGGGCACA AGAATGTCTA CTCCCGCAAC TACAACCGGC CGAATTATGG CGCGAGTCGG GACGGTGGGA AACCTACACC AAAGCAGAAG GGATCATGTT TTCCCTCATT GATAGACGAG ACACCGAATT AGGACTCGGT CCCACCCACG AAGAGGTGAT CACCACGATC GCTAAGGAGA TGATTCGATC TTATCGTCAA TTACCCGTCA ATTTATACCA AATTCAAAGC AAATTCCGTG ACGAAATTCG TCCCCGTTTT GGCTTGATGC GGGGTCGGGA ATTTATCATG AAAGATGCCT ATTCGTTCCA TGCGTCCGAA GACAGTCTCA AGGAAACCTA TCAAGCCATG GATCAAGCCT ACCGTAACAT GATTACGCGC TGTGGGCTGG AATTTCGGGC AGTTCAAGCT GATTCCGGGG CGATCGGGGG TTCAGCATCT CAAGAGTTTA TGATCCTCGC AGAAGCCGGA GAAGACGAAG TTCTCTATAC GGAAGATGGG AAATATGCGG CTAACGTCGA AAAAGCCGTA TCTTTGCCTC CTGATGCTGA ATTATCGCCC TTTACTACCC CCGAAAAACG GGAAACCCCT AACACCAACA CCATTGAAAA ATTGTGTCAG TTTTTGCAAT GTTCTGCGAC GGCTATTGTT AAAAATGTCC TTTATCAAGC CGTTTATGAC AATGGTAAGA CGGTTTTGGT GTTAGTAAGC ATTCGCGGGG ATCAAGATGT CAATGAAGTG AAGCTAACCA ACGAATTAGT TAGACTTGCA CCCCAATATC AAGCAACGAC TCTTTTAGCG TTACAGGTTC CCGATGAAAC GGCACAAGCT AAATGGGCAG CTAAACCGCT ACCCTTGGGG TATATTGCCC CAAATCTTGA GGATAATTAT ATTAGTTCAA TCCCAGATAT TACGCCTAAA TTCCTGAGAT TGGTAGATAA AACAGCAGTA GAGTTGAAAA ACTTTATTAC AGGGGCAAAT GAAAGCGGTT ATCACCAAGT TGGGGCAAAT TGGGGTCAAG AATTTGTGTT ACCGTCCTTG GTGGTGGATG TCAGAAAAGC GATGGCTGGC GATCGCGCGG TTCATGATCC GATCCAAACC CTACAAACCG CTAGAGGGAT CGAAGTCGGA CATATTTTCC AGTTAGGGGT GAAATATTCC CAAGCGATGG GGGCAACCTT TACGAATGAG CAAGGGGAAG AAAAACCCTT AATTATGGGG TGTTATGGGG TGGGAGTCTC TCGTTTAGCT CAAGCGGCGG TAGAACAGTC CTATGATAAA GATGGGATTA TTTGGCCAGT TGCGATCGCA CCTTATCATG CGGTTGTGGT TATTCCGAAT ATTAATGATG CTCAACAGGT AGAAGTAGCG GAAAAATTGT ACACTGAGTT AAATAAAGTG GGGGTAGAAA CGTTATTAGA TGATCGGGAT GAACGCGCTG GTGTGAAGTT TAAGGATGCC GAATTAATTG GTATTCCCTA CCGAATTGTA ACAGGGCGAT CGCTGCAATC TGGTAAAGTA GAATTGGTTG AAAGATCGAC TAAAAATTCT CAAGAAATTG CCATTGATCA AGTTGTAGAA ACTTTAAAAA AATTGATCAA TGTATGA
|
Protein sequence | MRLSQMLFVT LREDPAEAEI PSHKLLLRAG YIRRIGSGIY AYLPLMWRVL QKVSQIVREE MNAAGAQECL LPQLQPAELW RESGRWETYT KAEGIMFSLI DRRDTELGLG PTHEEVITTI AKEMIRSYRQ LPVNLYQIQS KFRDEIRPRF GLMRGREFIM KDAYSFHASE DSLKETYQAM DQAYRNMITR CGLEFRAVQA DSGAIGGSAS QEFMILAEAG EDEVLYTEDG KYAANVEKAV SLPPDAELSP FTTPEKRETP NTNTIEKLCQ FLQCSATAIV KNVLYQAVYD NGKTVLVLVS IRGDQDVNEV KLTNELVRLA PQYQATTLLA LQVPDETAQA KWAAKPLPLG YIAPNLEDNY ISSIPDITPK FLRLVDKTAV ELKNFITGAN ESGYHQVGAN WGQEFVLPSL VVDVRKAMAG DRAVHDPIQT LQTARGIEVG HIFQLGVKYS QAMGATFTNE QGEEKPLIMG CYGVGVSRLA QAAVEQSYDK DGIIWPVAIA PYHAVVVIPN INDAQQVEVA EKLYTELNKV GVETLLDDRD ERAGVKFKDA ELIGIPYRIV TGRSLQSGKV ELVERSTKNS QEIAIDQVVE TLKKLINV
|
| |