Gene Cyan8802_2516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_2516 
Symbol 
ID8391841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp2542134 
End bp2543156 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content41% 
IMG OID644980480 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003138217 
Protein GI257060329 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.19993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.244622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTGA ATTTTAGTAA ATCATCCTAT CTACAGTCTT CTTTAGTCTT GATCGCGCCT 
TTTTTCCTCT GGGGAACATC CATGGTTGCC ATGAAAGGAG TTCTTCCCCA CACGACTCCT
CTATTTATGG CAGGGGTTCG TCTTGTTCCT GCGGGAATTT TAGTCTTGAT CGCTGCTTCC
ATGTTAGGTC GTTCTCAACC CAAAACCCTA AAAGCTTGGC TATGGATCGC GTTATTTGCC
TTATTAGATG GCACAATGTT CCAAGGGTTT CTCGCAGCAG GGTTGATGAA AACGGGGGCC
GGGTTAGGAT CGGTGATCAT TGACTCCCAA CCCCTCGCAG TTGCGTTAAT GTCTAGTTGG
CTATTTGGCG AAATCATCGG AATTTGGGGA GGAATCGGAC TCGGAATCGG TATTTTAGGT
ATTAGTTTAA TAGGATTTCC TCAAGAATGG TTTCTTCATT TCTGGGAAAC TCAAGAAATT
GCCGTTTCTT TTCATTGGCA AGCTGTCTTG AATAGTGGGG AATTATTGAT GTTATTAGCC
TCCCTTTCTA TGGCTGCTGG AACTATTTGT ATTCGTTATG TCAGTCGTCA TACTGATGCA
GTGGTAGCTA CGGGATGGCA CATGATCTTA GGAGGACTTC CTCTATTTTT TGCTTCAGGA
CTGTGGGAGT CTGGCCAATG GAATGAGATT AATTTAAACG GATGGTTTGC CTTGAGTTAT
TCGACGATCT TTGGTAGCGC GATCGCTTAT GGAATCTTCT TTTATTTAGC TTCTAAAGGT
AATTTAACCA GTTTAAGTTC TTTGACGTTT CTCACTCCGG TTTTTGCTTT GACTTTTGGG
AATTTATTTT TAGCAGAGGT TTTAACTCCC TTTCAATGGA TGGGAGTTGG CTTAACGTTA
GTGAGTATTT ATTTGATTAA CCAACGAGAA ATTATTGGAG AACAATTACA GTCTTTAATC
TTGTTTAATA ATCAACTCAA GCTTAAACTT AGTACTGTTT TAGTTAATCG TGAGCTTAAA
TAA
 
Protein sequence
MNLNFSKSSY LQSSLVLIAP FFLWGTSMVA MKGVLPHTTP LFMAGVRLVP AGILVLIAAS 
MLGRSQPKTL KAWLWIALFA LLDGTMFQGF LAAGLMKTGA GLGSVIIDSQ PLAVALMSSW
LFGEIIGIWG GIGLGIGILG ISLIGFPQEW FLHFWETQEI AVSFHWQAVL NSGELLMLLA
SLSMAAGTIC IRYVSRHTDA VVATGWHMIL GGLPLFFASG LWESGQWNEI NLNGWFALSY
STIFGSAIAY GIFFYLASKG NLTSLSSLTF LTPVFALTFG NLFLAEVLTP FQWMGVGLTL
VSIYLINQRE IIGEQLQSLI LFNNQLKLKL STVLVNRELK