Gene Cyan8802_2379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_2379 
Symbol 
ID8391699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp2391019 
End bp2392779 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content50% 
IMG OID644980346 
ProductCarbohydrate-selective porin OprB 
Protein accessionYP_003138088 
Protein GI257060200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.934978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCAAA GTTTGTCTCG AATTGTCGCA ATAACCCCAG GAGTCTTAGG ACTGTTGTTA 
TTAGTGAGTC CAGGCGCAAT TGCCTCTCCT GAACTCCCCG TAGAAACGAC TGACTCTGAT
ACGATTAATC CCACAGAAGC GTTAGGAGTC CTGCGTAATC GTCCCCAACT GGCTAACCCT
CTCAACCGAA GCGGACAACA ACAGTTTAAC CCCTCTGCTG CCCAAGTCAC CAGTGTGTCT
GAACTACGCG ACGTTGCTCC GACCGACTGG GCCTATGAAG CCTTACGGAG TCTGGTAGAA
CGCTACGGCT GTATTGTAGG CTATCCCGAT CGCACCTTCC GAGGCAACCG AGCGACCTCT
CGTTGGGAAT TTGCCGCCGG GTTGAATGCC TGTTTAAATA CCATCGAAAG ACTGCTACAG
GAAAACGTCG CCGTTTTACG CGAAGATATC GAAAAATTAA AGCGATTAGC CCAAGAATTT
GAAGCAGAAT TAGCTGCTTT AGGCGCAAGA GTCAGTAACC TCGAAAGTCG CGTCGCTTAC
CTCGAAGACC ATCAATTTTC CACCACCACC AAGCTACGGG GAGAAAGTAT TATTACCGTT
TCTGCTGCGT GGGGAGAACG AGCCCTCGAC TTCCGAGAAC AGGATTTATT CAACCAAGGA
TTACTCGAAC AACGACGCAT TGACGATAAT GCCGTCATCG GTCATCGGAC TCGCTATAAC
TTCGATACCA GTTTCACCGG GAATGACCTC CTCAAAACCC GCTTTGAAAC GGGAACCATC
GTTGATTGGT CTGATCCCAC CGGGACAAAT ATGGCTCGTC TGGGACACGA TTCTGATCGC
AATTCTAAGA CCTTTATTGA TGACGTTTAC TATCGTTTCC CTTCAGGGGG TTTAACCACT
TGGATCGGGG CTAATTCCTT GGATATTGAC GATATCTTCG ATGTAGGCAA CCCCCTCCTC
TTCGCCGAAG AATCAGGGGC TCTCTCGCGC TTTCTGCGCT ACAATCCGTT GACCTTTCGC
GGGTCAGAAG GTAAGGGGGT TGGCTTTAAC TACAAATTCA ACGATATCTT CACCGTCCGA
GGACTCTATC TGACCGATAC GGGGAATAAT CCAGCGCAAG GGAGCGGGTT ATTTAACGGA
AATTACAGCA CAGGAGGGCA ATTAGGGGTT TATCCTTCCG ATAGCCTCGC CTTTACCTTT
ACCTACCTCC ATACCTACTT CAGATCTGGA AGTTCCGATA TTACTGGCAG TACTGGCAGT
TACGTCGAAG CGAATAACCA AAGTGATCAA ACCGGGACTG GGGTAGCTAG AGATCCCTTC
TTAGGGGCTC CCACCATTCG GGATAGCTAC GGCATTACCG CGAATTGGCG CATTAACCAG
ACCTTTAACC TCTCCGCTTG GGGTGGATAT GCCTTAGCGC GAGCTCAGGG GTCTGACGCT
TCGGGGAATA GCCGTAAGGG GTTTGGGGCT GATATTTGGG CTTGGAGTGC CTCCTTATCT
GTCGTGGATC TCGGTAAAGA GGGAGCCGTT TTGAGTGTCG CCGGAGGGTC TGCTAGTAAT
GCGCGGCGTA TTGATGCCTT AACGGGAGAT TTGGCCGTTC CTGACCAAGA TACCCCCTAT
ATGGTGGAAA CTCAGTACCG TTATCCCCTC AGCGATAATA TTCTGTTGAC TCCGGGTGTC
TATGTCATCA TTAATCCCGA TGGTAACAAC GGCAATAATA GTATTTGGGT TGGAGCACTG
CGGACAACGT TTACGTTTTA G
 
Protein sequence
MFQSLSRIVA ITPGVLGLLL LVSPGAIASP ELPVETTDSD TINPTEALGV LRNRPQLANP 
LNRSGQQQFN PSAAQVTSVS ELRDVAPTDW AYEALRSLVE RYGCIVGYPD RTFRGNRATS
RWEFAAGLNA CLNTIERLLQ ENVAVLREDI EKLKRLAQEF EAELAALGAR VSNLESRVAY
LEDHQFSTTT KLRGESIITV SAAWGERALD FREQDLFNQG LLEQRRIDDN AVIGHRTRYN
FDTSFTGNDL LKTRFETGTI VDWSDPTGTN MARLGHDSDR NSKTFIDDVY YRFPSGGLTT
WIGANSLDID DIFDVGNPLL FAEESGALSR FLRYNPLTFR GSEGKGVGFN YKFNDIFTVR
GLYLTDTGNN PAQGSGLFNG NYSTGGQLGV YPSDSLAFTF TYLHTYFRSG SSDITGSTGS
YVEANNQSDQ TGTGVARDPF LGAPTIRDSY GITANWRINQ TFNLSAWGGY ALARAQGSDA
SGNSRKGFGA DIWAWSASLS VVDLGKEGAV LSVAGGSASN ARRIDALTGD LAVPDQDTPY
MVETQYRYPL SDNILLTPGV YVIINPDGNN GNNSIWVGAL RTTFTF