| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_2326 |
|---|
| Symbol | |
|---|
| ID | 8391646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 2341693 |
|---|
| End bp | 2342229 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644980295 |
|---|
| Product | protein of unknown function UPF0054 |
|---|
| Protein accession | YP_003138037 |
|---|
| Protein GI | 257060149 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0319] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.475999 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCTT CTGCCAACCA TCCTATCCAA GTTGACCTTA ATCTTCAGAA TGTTTTTGAC
TTTAATGCCT TCTGTGATCA AAAATCCTCT GATATCATGG CAGCAACTTG GCAACCGTGG
ATTAAAACTT GGTTAGAAGC TCTCAAGCCA AATCTTCCGC CCGCAGATAC CTATGAACTC
ACTCTACGGC TAACAGAAGA TCTCGAAATC CAAACCCTCA ATGCCCAATA CCGTCAGAAA
AATCAGCCTA CCGATGTTCT AGCGTTTGCC GCCCTCGAAG TCGACTTTCC TGTCCCCGCA
GAAGAGATAG CAGCCCTTGA ACCCTTATAT TTAGGAGATA TCATCATTTC AGTGGAAACA
GCCAACAAAC AAGCGCAGCA AAACCATCAT AGCCTACTCG TAGAATTAGC TTGGTTAGCT
GCTCACGGAT TACTCCATCT ATTAGGTTGG GATCATCCAG ATGAAGACAG CCTTGAAGCG
ATGCTCTCAC AGCAAGAAAC TTTGTTAACA TTAGTGGGTC TTCAGGCAAA TGGTTGA
|
|---|
| Protein sequence | MVSSANHPIQ VDLNLQNVFD FNAFCDQKSS DIMAATWQPW IKTWLEALKP NLPPADTYEL
TLRLTEDLEI QTLNAQYRQK NQPTDVLAFA ALEVDFPVPA EEIAALEPLY LGDIIISVET
ANKQAQQNHH SLLVELAWLA AHGLLHLLGW DHPDEDSLEA MLSQQETLLT LVGLQANG
|
|---|
| |