Gene Cyan8802_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_2248 
Symbol 
ID8391567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp2265752 
End bp2266354 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content48% 
IMG OID644980219 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_003137962 
Protein GI257060074 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0496433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.289042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCT TAACGCCCGC CCAACAAGAA CTTTTTGACT GGTTAGTTGA GTATATTGAC 
CAAACTCAAC ATGCTCCTTC AATCCGCCAG ATGATGTATG CGATGAATCT GCGATCGCCA
GCCCCCGTGC AAAGTCGTCT AGAACGCTTG CGAAATAAAG GGTATATCGA TTGGATAGAA
GGCAAAGCCC GCACCATTCG CATTTTACGA CCTAAACCCA AAGGAATCCC CGTTTTAGGC
GCGATCGCGG CGGGGGGTTT AGTGGAACCC TTTACCGACG AAAAAACTAA GCTAGATTTA
ACCAAAATCA CTGAACAGAA AAATTGCTAC GCGCTGCGAG TCACCGGAGA TAGCATGATC
GAAGATTACA TCGCTGAAGG GGATGTGGCG ATTATGCGTA CCCTATCGGG GGATGAACGC
CCCAAAGAGG GAGACATTGT TGCCGCGATT GTCGCTGGAC TCGGAACCAC CCTAAAACGT
TTCTATCAAG AAGGAGAAAT GGTCATCCTT CAAGCGTCTA ACGCTCGATA TCAACCGATT
AGAGTCAGTG CCGATCAAGT GACTATCCAA GGGATATTAA TCGGAGTTTG GCGAGGCTAT
TAA
 
Protein sequence
MESLTPAQQE LFDWLVEYID QTQHAPSIRQ MMYAMNLRSP APVQSRLERL RNKGYIDWIE 
GKARTIRILR PKPKGIPVLG AIAAGGLVEP FTDEKTKLDL TKITEQKNCY ALRVTGDSMI
EDYIAEGDVA IMRTLSGDER PKEGDIVAAI VAGLGTTLKR FYQEGEMVIL QASNARYQPI
RVSADQVTIQ GILIGVWRGY