Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_2222 |
Symbol | |
ID | 8391540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 2235625 |
End bp | 2237823 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644980194 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_003137938 |
Protein GI | 257060050 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.513474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0596169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACC AACATCATTG TCCCTTGTGT GGATCGCCTT TATTATCTCA TGTTCGCCGG GGTAAATTAG GTTGGTTTTG TCGCCATTGT GATCAAGAAG TTCCCTACAG TGTGGATGAA AATGAACCAG AAACTCCGGC GAGCCATAAC GGACATCAAG TAGCAAGTAT CGCTCAAAAC TGTTTAAAAT CTCTTAACAA AAGCCAATTA GACTCTCATG TAACCAGCGA TCGCTCCTTC AGTCCCCTCA GTACACCCCT TACGGCTCCC TTTACGGTGC GCGATGTTCT CCATACCTCG GTCAGAGGAA TTAGCCAATT TTTGCAAGCT GATCGCGTGA TTGTCGCTCA AATCACCCCT TCTGGCGAAA TTTCGGTCAT TGAAGAGTGT CGTAAACGGC CTTGGAAAAC CATGCTCCAT TTAAGACTGG GACAATTTCT CAGTTTTCAA GATATTCAAA GATGGCAACA GGGGAAAATA CAGACCATTA ACGATGTTCA TCAAGAAGGG TATCGGGAAT CAAGTATGAT GACCCTGGAT AATCTCTTCG AGGTCAAAGC CAAAATTGTT GTTCCTATCC TACAAAATCA GGCTTCTTTG ACCCTAGAAA CCCCTCAATG GAGCAATTGC GAACATCGCT CTAACCAGCC CCTTCCAGGG CAATTATGGG GCTTACTTAT CGCTCATCAA TGTTCAAATA CCCGTCAGTG GACTAACGCA GAAATCGGAT TATTATCCTT ATTAGCTTCC CAAATTGCCA TAGCTATTCA ACAGGATAGC TTTTATCAAC ACCTCAATGC CATTAATCAA AAACTCGAAC AAATTGCCTT TGTTGATCGC TTAACGCAAA TTTCTAATCG TTGCTATTTT GAACAATATT TTACTCAAGA ATGGCGACGC ATGGCTAGGG AAAAACAGCC TCTTTCTTTA ATTCTTTGTG ATGTCGATTT TTTCAAATCC TACAATGATA CCTATGGTCA TCTGGAGGGG GATTTTTGTT TACAAAAAAT TGCTCAAGCA ATTAATACGA GTATTCATCG GCCAGGGGAC TTAGTAGCAC GTTATGGGGG AGAAGAATTT GTAATTCTTT TACCCAATAC TAAGGCATCA GGGGCTCTTT ATATTGCTGA ACAAATTCGT TCTCAGGTTA AAGGATTAAG GATGACTTCA GCTTGTCAAG AAGTCAGTCC TTTTGTTACC CTAAGCCTAG GGGTAGCCAG TTTTATTCCT GATGAAAGTT TATTACCAGC GATGTTAATT TCCGAGGCGG ATCACGCTTT ATATGAAGCT AAAAAACAAG GACGCGATCG CGTGGGTTTT AAGGCTGTTG ATAACAGCAC TGAGACTTCA GTTTCTTCCC CCATTATTCC CTCTTCTTTC GACTTAGAGA GTCCCATCGA TAGAATAAGC AACCTTGAGT TATTACGGAG TTATGTTGCC TATTTTGTTA GTCGTGGGAT TAAAATTGCC AGTCCCATTG CTGGCGAATT ATCCTTTGAG GGATTAGTCT ATCAATACCA CGGTTATCAT CAAGAGTTTC TTACGTTTTG GCAACAATTT GAACACCGTT CTGATTATCA ACAACTGCAT TTACAAGGAG ATAGTCATAG TTTTGGAGAA TTTCTGCAAG GAGATTGTAC TGTTAATGAG TGTGCCCGTT GTAATTTACC GATTATTAAT CCGGTTGATC GTATTTATGA TATTCCCAGT TGTACCCTGT GTTTAGAAGA TTGTGTTTCA GGAAAATGGT GTGAATTAAA TAAACCCATT AGCAATAATC ATCAGTGCTC AAAACTTAGG GTTTTAATCA TTAGTCCAAA AACCAAAAAA CTCACCATAA TGAAACAATG GTTAGCCTCT AATGATGTAG AATCTATCTT TATTAATGAG CCAAAAGACG TTGAATCTTT GTTAATTTCC CAAGCAATTG ATAGTATTGT TATTGATGCT AATATCTCGG AACCTGAAGT TAAAACTTGG GCTAATCAAT TACGAGAACA TCCTCAACTT AAAGAGGTTC CGATTATTGC TTTGAGTGAT GAAGCGGGAC AAGGAATCCC TTGGATTAAC CGAAAATTAG GTATAGAAGA TTATTTAGTT ACCCCTTTAA ATGGAGAAAC ATTAGCGATG TATTTACGCT ATTTAACCAA GGTACATTGC CCTAGTAATG TAACAAATAT CTATTGGTTT CCTAGATAA
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Protein sequence | MADQHHCPLC GSPLLSHVRR GKLGWFCRHC DQEVPYSVDE NEPETPASHN GHQVASIAQN CLKSLNKSQL DSHVTSDRSF SPLSTPLTAP FTVRDVLHTS VRGISQFLQA DRVIVAQITP SGEISVIEEC RKRPWKTMLH LRLGQFLSFQ DIQRWQQGKI QTINDVHQEG YRESSMMTLD NLFEVKAKIV VPILQNQASL TLETPQWSNC EHRSNQPLPG QLWGLLIAHQ CSNTRQWTNA EIGLLSLLAS QIAIAIQQDS FYQHLNAINQ KLEQIAFVDR LTQISNRCYF EQYFTQEWRR MAREKQPLSL ILCDVDFFKS YNDTYGHLEG DFCLQKIAQA INTSIHRPGD LVARYGGEEF VILLPNTKAS GALYIAEQIR SQVKGLRMTS ACQEVSPFVT LSLGVASFIP DESLLPAMLI SEADHALYEA KKQGRDRVGF KAVDNSTETS VSSPIIPSSF DLESPIDRIS NLELLRSYVA YFVSRGIKIA SPIAGELSFE GLVYQYHGYH QEFLTFWQQF EHRSDYQQLH LQGDSHSFGE FLQGDCTVNE CARCNLPIIN PVDRIYDIPS CTLCLEDCVS GKWCELNKPI SNNHQCSKLR VLIISPKTKK LTIMKQWLAS NDVESIFINE PKDVESLLIS QAIDSIVIDA NISEPEVKTW ANQLREHPQL KEVPIIALSD EAGQGIPWIN RKLGIEDYLV TPLNGETLAM YLRYLTKVHC PSNVTNIYWF PR
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