| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_2046 |
|---|
| Symbol | |
|---|
| ID | 8391362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 2062369 |
|---|
| End bp | 2063295 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644980025 |
|---|
| Product | Spermine synthase |
|---|
| Protein accession | YP_003137770 |
|---|
| Protein GI | 257059882 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | [TIGR00417] spermidine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.839676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGTA CAGAAATTAA GGCAGATTTG TGGGTTAATG AGTATATTAC TCCGTGGGAT
ATTTATAGTC ACGGAGTTAC CCGTATTCTT GCTTATAAAA AAACCCAGTA TCAGGAGATG
TATATTGTTG AAAGTGGTGC CTATGGTAAG GCATTAGTAC TAGATGGAAA ATGGCAATCT
TGTACGGGGG ATGAATTTAT TTATCATGAA GGGTTAGTTC AACCAGGAAT GATTTCCCAT
CAAGCTGTTA AAAAAGCGTT AATTTTAGGG GGAGGAGAAG GGGCAACTAT TCGAGAAATT
TTGCGCTGGA AAGCAATAGA AAAGGTTATG ATGATTGATA TTGATGGAGA AGTGGTAGAT
GCTTGTAAAG AATATTTGCC AGAAATGCAC CAAAATTGTT TTGATGATCC ACGGGTAGAA
CTAAAGATTG ATGATGCTTT AGAAGTCTTA GATAATATGT CTGAAAAATG GGATCTTATT
GTTTCAGATT TATCTGATCC CATTGAAGAG GGACCCTCAT TTCCCTTATT TACTAAAGAA
TATTATGAGA AGCTTCAAAA AGTCTTGAAT CCAGGGGGAT TAGTCATTAT TCAAGCGGGA
CAAGTTGCCC CTCCTTTTAT TAAATATCAT GCGCGTTTAG TTAATACCTT AAAAGCCGTT
TTTCCTTACG TTCATCCCTA TTTTGCTCCC ACCCCTAGCT ATGGTTCTCC TTGGGGATTT
GCCATTGCCA GTCACGAACC TGTCAATACT GTACCTGATC CCATTGCTGT TGATCAATTA
TTGGCAGAAC AAACCACAGG AGGATTACGA TTAATCGATG GACAAACCCT CTTAGGAATG
TTACAAACTC CTTTGTATAT TCGACAAGCG ATCGCCAACT ATACCGAAGT TTATACCCTC
AAAGAACCGC CTAAGTTTTT TAGTTAA
|
|---|
| Protein sequence | MSGTEIKADL WVNEYITPWD IYSHGVTRIL AYKKTQYQEM YIVESGAYGK ALVLDGKWQS
CTGDEFIYHE GLVQPGMISH QAVKKALILG GGEGATIREI LRWKAIEKVM MIDIDGEVVD
ACKEYLPEMH QNCFDDPRVE LKIDDALEVL DNMSEKWDLI VSDLSDPIEE GPSFPLFTKE
YYEKLQKVLN PGGLVIIQAG QVAPPFIKYH ARLVNTLKAV FPYVHPYFAP TPSYGSPWGF
AIASHEPVNT VPDPIAVDQL LAEQTTGGLR LIDGQTLLGM LQTPLYIRQA IANYTEVYTL
KEPPKFFS
|
|---|
| |