Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_2009 |
Symbol | |
ID | 8391325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 2028811 |
End bp | 2029380 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644979990 |
Product | Tail Collar domain protein |
Protein accession | YP_003137735 |
Protein GI | 257059847 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.410779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.314034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGAAC CCTTTGTTGC TGAAATTAAG ATGTTTGGGG GAAACTTTGC CCCTGTAAAT TATGCTTTCT GTGACGGGCA ATTAATGCCT ATCAGCCAAA ATAGTGCTTT ATTTTCCCTG CTTGGCACAA CTTACGGAGG AAATGGCATC AGTACCTTTG CTTTACCCGA TCTCAGAGGA CGAGTACCCA TGCACCCTGG TAATGGACCT GGGTTGTCTC CTCGCGTGTT AGGAGAGAGT GATGGAAGCG AGACTGTCAC CCTACTGAGC AATAATGTCC CTTCTCATAC CCATACAGCT TCCTCGACAG CGACTTCGGT GATGCGGGCT AATAATACCG CCACCGACAA CGCACTCGAT CCCACTGGCC GAGGACTAGG GATCGCTGAC CGAGATGTTT ATGTCAATGC TGCCCCCAAT GTGGATATGA TAGCAGGATC GGTGAACACA ACGGTTAACA CGACCATTTC TCCAAATACA GGAGGAAACG CCCCAGTATC CATTATGCAG CCTTTTCTTT GTGTCAGTTT TATTATTGCG TTGAACGGAA TATTTCCCTC GCGTAGTTAA
|
Protein sequence | MTEPFVAEIK MFGGNFAPVN YAFCDGQLMP ISQNSALFSL LGTTYGGNGI STFALPDLRG RVPMHPGNGP GLSPRVLGES DGSETVTLLS NNVPSHTHTA SSTATSVMRA NNTATDNALD PTGRGLGIAD RDVYVNAAPN VDMIAGSVNT TVNTTISPNT GGNAPVSIMQ PFLCVSFIIA LNGIFPSRS
|
| |