Gene Cyan8802_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1952 
Symbol 
ID8391267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1971431 
End bp1971814 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content36% 
IMG OID644979932 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003137678 
Protein GI257059790 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCC GTTTAATTTC GTCAAACTCG TCTTTTGAAG AAGCCATTGG TTATTCCCGT 
GCTGTTATAG ATGGAAACTG GTTATTTTTA TCGGGAACAA CCGGATTTAA TTATCAAATA
ATGACTATTT CTGAAAATAT TATTGAACAA ACCGAGCAAT GTTTTACCAA TATGGAATCG
GTTTTGATTG AAGCCGGATT TAGTTGGCAT GATGTGATCA GAGTTCGCTA TATTTTACCT
AATCGAGACG ATTTTGAACC CTGTTGGCCA ACGATAAAAA AATATTTAGG TTCAGTTAAA
CCTGCTTCAA CGATGATAGT AGCGGGATTA GCCGATCTTC GCATGAAAAT TGAAATTGAG
TTAACAGCTT ATCGGTCTTC TTAA
 
Protein sequence
MPRRLISSNS SFEEAIGYSR AVIDGNWLFL SGTTGFNYQI MTISENIIEQ TEQCFTNMES 
VLIEAGFSWH DVIRVRYILP NRDDFEPCWP TIKKYLGSVK PASTMIVAGL ADLRMKIEIE
LTAYRSS