Gene Cyan8802_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1945 
Symbol 
ID8391260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1964578 
End bp1966833 
Gene Length2256 bp 
Protein Length751 aa 
Translation table11 
GC content49% 
IMG OID644979925 
ProductFHA modulated glycosyl transferase/transpeptidase 
Protein accessionYP_003137671 
Protein GI257059783 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAA AACCCCCTTC TCCCCCTCAA TTTCCCCTAA GTCAATTAGT AACCCAAGCG 
GTACAACACC TTGGGAAAGG CAAGCTGAGT CCCACCAGTC TTAACAAAGG GGCAAAAGTG
CCGGAATTAT GGGTAGAAGC AGGAGACGGC GATCGCCCAC AAGTCTATTC ATTAATTGGC
GATCGCTACA TTTTGGGGCG GAGTTCGAGA TCCTGTGATA TCGTTATCCC CAACGGGGTC
GTCAGTCAAG TCCACTGTTC CCTGCACCGA GACAAGAAAA ACCCCCACCA CTTCATCCTC
GAAGACGAAC ACTCCACCAA CGGCATCTAC TGCAACCGAC GACGACTCAA AAGCCTCACC
CTACGTCACG GCGATGTCAT TACCCTCGGT CCCCCAGAAC TGGCCAAAAC CGCTAAAATC
ACCTACCATA ACCCCCCTGC GGCCTGGCGA CAACTCATCC CCTACAGCTT ATACGGCATC
GGCGGACTCT TAGCCCTCCT AACCCTGGCT ATTATCTGGG AAGGTCGTAA ATATAGCGTT
TATCCTCTAC CATCGGGGGT GAGTGGTCCG GTGGTCATTT ATGCTAGGGA TGGGCAAACC
CCCCTAAACC CCATTAGTAA GCAGACCCAC CAAGAAATTG ACCGTGTACG GGAATTTTCC
GCCTATTTAC CTAAAGCTCT CATCGCCTCC GAAGATAGCC GTTTTTATTG GCATTTTGGA
GTCGATCCCT ACGGTATTGT GCGAGCATTA GTCATTAATT CCCAAGATAA AGGCATTCGT
CAGGGGGCAA GTACCTTAAC CCAACAGTTA GCCCGCAGTT TATTTCCCGA AGTGGGACGG
GAAAATACTG CCGGACGTAA GTTACGCGAG ATCATCGTTG CCTTGAAATT AGAGGCAGTC
TATAGCAAAG ATACTATCCT CAAAACCTAT CTCAACCAAG TCTATCTAGG AGTTGGTAAT
TATGGCTTTG AAGATGCCGC CCAATTCTAT TTTGAGAAGT CAGCCAGGGA ATTAAGTCTA
GCCGAAGCAG CGACCCTGGT AGCCATGTTA CCTGCCCCGA ACCTCTATAA CCCCGTTCAG
GACTATGATA CCTCCGTTCA ACTGCGTAAC CGAGTCATCA CTCGTATGGC TGCTTTAAAG
ATGATCAGCC CCGAAGAAGC GGATCGGGCG AGGCGATCGC GTATTCAAAT TAGCCCTAAA
GCCACCAAAG CTCTCTCTAG CAGTATTGCC CCCTATTTCT ATGGTTACGT TTTTGAAGAA
CTACGGGACT TATTAGGGGA TGAAGTGGCC AAAGAAGGCA ATTTTATCGT TGAAACGGGA
TTAAATCTGG AACTGCAAGC CAAAGCCGAA AAAAGCTTGA AACAGTCGGT TAAAACCACC
GGACCAGCTT ATAAATTTTC CCAAGGAGCC ATCGTCACCT TAGACAGCAA AACTGGAGAA
ATTTTAGCCT TGGTCGGAGG AAACGACTAT AAACAAAGCC AATTTAACCG TGCTACCCAA
GCCAAACGAC AACCGGGATC AACTTTTAAG GTGTTTGCCT ATGCAGCAGC CATGGAAAAG
GGCATTTCCC CCGGTAAAGT CTATTCCTGT AGTGGAGTCT ATTGGATGGG ACAAGCCTAT
AAACCCTGTG AACGCAGTGG GGGAGCCGTG GATATGTATC GAGGGTTGGC TCTGTCGGAA
AACGCGATCG CCCTACGGGT AGCCCAGGAT GCGGGGTTAA ACCGCGTGAT CGAGATGGCG
CAACGGTTGG GGGTAAAATC GGAGTTACAA GCTTCCCCAG GCTTAATTTT AGGGCAAAGC
GAAGTCACCC TCTTAGAAAT GGCCGGAGCC TATGGAACCT TTGCCAATGA AGGGGTGTGG
AAGCGTCCCC ATGCTATTCG TCGTATTCTT GATGGAGGAG ACTGTACCGA TCCTAAGAAA
TGGCAGACTT GTCGGGTGGT TTATGCCTTT GATGAGGATA AAAACAGTAC AAAACAGGCG
ATTTCTCCCG CTTTAGCCCA AACAATGACC AATTTATTGC GGGGAGTGGT TCAAAGCGGA
ACAGGGCGAA TAGCCAGTAT TGGACTCGGA GAAGCCGGAA AAACCGGAAC CACCGATAAA
GCCGTCGATC TTTGGTTTAT CGGGTATGTC CCCAGTCGTG CCATCGTAAC GGGGATCTGG
CTAGGGAATG ATAATAATTC CGCAACACAA GGTAGTAGCG GCCAGGCAGC CGCTTTGTGG
GGCAATTACA TGGCACAAGG GTTAACTTCT CGTTAA
 
Protein sequence
MTSKPPSPPQ FPLSQLVTQA VQHLGKGKLS PTSLNKGAKV PELWVEAGDG DRPQVYSLIG 
DRYILGRSSR SCDIVIPNGV VSQVHCSLHR DKKNPHHFIL EDEHSTNGIY CNRRRLKSLT
LRHGDVITLG PPELAKTAKI TYHNPPAAWR QLIPYSLYGI GGLLALLTLA IIWEGRKYSV
YPLPSGVSGP VVIYARDGQT PLNPISKQTH QEIDRVREFS AYLPKALIAS EDSRFYWHFG
VDPYGIVRAL VINSQDKGIR QGASTLTQQL ARSLFPEVGR ENTAGRKLRE IIVALKLEAV
YSKDTILKTY LNQVYLGVGN YGFEDAAQFY FEKSARELSL AEAATLVAML PAPNLYNPVQ
DYDTSVQLRN RVITRMAALK MISPEEADRA RRSRIQISPK ATKALSSSIA PYFYGYVFEE
LRDLLGDEVA KEGNFIVETG LNLELQAKAE KSLKQSVKTT GPAYKFSQGA IVTLDSKTGE
ILALVGGNDY KQSQFNRATQ AKRQPGSTFK VFAYAAAMEK GISPGKVYSC SGVYWMGQAY
KPCERSGGAV DMYRGLALSE NAIALRVAQD AGLNRVIEMA QRLGVKSELQ ASPGLILGQS
EVTLLEMAGA YGTFANEGVW KRPHAIRRIL DGGDCTDPKK WQTCRVVYAF DEDKNSTKQA
ISPALAQTMT NLLRGVVQSG TGRIASIGLG EAGKTGTTDK AVDLWFIGYV PSRAIVTGIW
LGNDNNSATQ GSSGQAAALW GNYMAQGLTS R