| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1940 |
|---|
| Symbol | |
|---|
| ID | 8391255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 1961530 |
|---|
| End bp | 1962738 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644979920 |
|---|
| Product | hydroxyglutarate oxidase |
|---|
| Protein accession | YP_003137666 |
|---|
| Protein GI | 257059778 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGATT TTTCGATTAT TGGTGGTGGT ATTGTTGGAC TCTCGACAGC TATGGCATTA
GGGGAACGAT ACCCCCATGC TTCAATTATT GTTTTAGAGA AAGAAAATGG TCTTGCCTAT
CATCAAACGG GTCATAATAG TGGGGTCATC CATTCAGGAA TTTACTATAA ACCCGGAAGT
TTTAAGGCCA AATTTACCCG CGCGGGTAGT CAATCAATGG TTCAATTTTG CCAAATTCAT
GATATTCCCC ATGAGGTTTG TGGTAAGGTC ATTGTCGCTA CCAAAGAAGA GGAATTACCC
CGTTTAGAGA ATCTCTACCA ACGGGGATTA GAAAATGGCT TAAAGGTCAA AAAAATTAGT
GCTGAAGAAG TTAAAGAAAA AGAACCTCAT GTGCAATGTT TAGCCGGAAT TTATGTACCC
ACTTCTGGCA TTGTTGATTA TCAACAAGTT TGTCAAAAAT ACGCTGAACT CATCCAAAAA
CAAGGGGGAG AAATTCGCCT CAATACCCAA GTCCAACAAA TTATTAAAAC CGCTCAAGGA
CAAGTCTTAG AAACCCCTCA AGGAACCGTT CATACCCACT TTGTCATTAA TTGCGCGGGA
CTCTATAGCG ATCGCATTGC CCAATTAGGA GGGGTGAACC CCCAAGCCAA AATCGTTCCC
TTTCGCGGTG AATATTACGA ATTAGTCCCC GAAAAACGTT ATTTAGTTAA AAATCTCATT
TACCCTGTTC CTAACCCTGA TTTCCCCTTT TTAGGGGTGC ATTTTACCCG CATGATCGAT
GGTAGTATTC ACGCGGGTCC CAATGCGGTG TTAAGTTTCA AACGAGAAGG GTATAAAAAG
ACGGATTTTG ACCTCAAAGA TTTAGGTGAA GTGTTGACCT ATCCAGGGTT TTGGAAACTA
GCCGCTAAAC ACGCGGATGA GGGAATTAAG GAAATCATTC GGTCTTTGAG TAAAGCTGCT
TTTGTCCATA GTTTACAACA ATTAATTCCA GAGGTTCAAG CAGCCGATAT TATTCCCAGT
GAGGCAGGAG TCCGTGCTCA AGCCTTACAA GCTGATGGTA AGTTAGTGGA TGACTTTTTA
ATCATTCAAG ATCACCAAGC TATGCACGTT TGTAACGCAC CTTCTCCGGC GGCGACGGCT
TCTCTTGAAA TTGGTAAGGC CATTGTCTCA CAAATTCCCC AACTGGAAAC TGAGGCGGTG
ATCAATTGA
|
|---|
| Protein sequence | MYDFSIIGGG IVGLSTAMAL GERYPHASII VLEKENGLAY HQTGHNSGVI HSGIYYKPGS
FKAKFTRAGS QSMVQFCQIH DIPHEVCGKV IVATKEEELP RLENLYQRGL ENGLKVKKIS
AEEVKEKEPH VQCLAGIYVP TSGIVDYQQV CQKYAELIQK QGGEIRLNTQ VQQIIKTAQG
QVLETPQGTV HTHFVINCAG LYSDRIAQLG GVNPQAKIVP FRGEYYELVP EKRYLVKNLI
YPVPNPDFPF LGVHFTRMID GSIHAGPNAV LSFKREGYKK TDFDLKDLGE VLTYPGFWKL
AAKHADEGIK EIIRSLSKAA FVHSLQQLIP EVQAADIIPS EAGVRAQALQ ADGKLVDDFL
IIQDHQAMHV CNAPSPAATA SLEIGKAIVS QIPQLETEAV IN
|
|---|
| |