Gene Cyan8802_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1889 
Symbol 
ID8391204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1922940 
End bp1923776 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content38% 
IMG OID644979875 
ProductABC-2 type transporter 
Protein accessionYP_003137621 
Protein GI257059733 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.2496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTAT CAATCAAAGC TAACGCCCAG TGGTCGCCTT TCAAGCGATA TCTGGAGTTG 
CTTCACATTT TAGTGGAACA AAATTTAAAA GGACGATATC GAGGTTCGTT CTTAGGAGTC
TATTGGTCTT TGCTCAATCC TTTGATTATG ACAGGACTCT ATGCAGCCAT TTTTGGGACG
GCTTTTGCCA AATTCTATGG TGATTCCATA TTGAATTATG TTCTAGCCGC GTTTACTGGA
CTAATTGTCA TCAATTTTTT CTCAGCCTCG ACAACCCAAG CTTTAGCCAG TATCGTTGGG
AATGGGGCAC TACTCAATAA AATTAGATTG CCTCTGACGA TTTTTCCCGT TTCTATGATT
GTGGCTAATA TTTTTCAATT TGTTATGGGT CCTTTGCCCT TATTAGCTAT TGTCACCTTG
CTAATGACTA AAAATCCCCT GAATGTCTTG GCTTTGGTTT TTCCCTTAAT CGCCTTAAGC
TTAGTCTGTA CGGGGGTAGG ATTTTTAGTG AGTGCCTTAT ATGTCTTTTT TCGGGATTTA
CCCTATTTTT ATGAATTAGT TTGTTTTGTG CTATGGATCA GTTCCCCAGT CTTTTATCCT
CCTGAGATTG TTCCTCAAAG CGTACAATCA TTTTTATTCC TTAATCCCTT AAGTCCTATC
ATTGAAAGTA TTCGTTACAT ATCTGGAATA GATACTACTA TTGCTGCTGA TATACCCGTA
ACCATCATGA ATATTGTTAT GATTGTTGGG CATTCGTTTT TTAATGGAAT CATTCTTTTA
ATGCTAGGCT GGATTTGTTT CCGAGCTTGG CAAAATCAAT TTATGGACTT GCTCTAG
 
Protein sequence
MALSIKANAQ WSPFKRYLEL LHILVEQNLK GRYRGSFLGV YWSLLNPLIM TGLYAAIFGT 
AFAKFYGDSI LNYVLAAFTG LIVINFFSAS TTQALASIVG NGALLNKIRL PLTIFPVSMI
VANIFQFVMG PLPLLAIVTL LMTKNPLNVL ALVFPLIALS LVCTGVGFLV SALYVFFRDL
PYFYELVCFV LWISSPVFYP PEIVPQSVQS FLFLNPLSPI IESIRYISGI DTTIAADIPV
TIMNIVMIVG HSFFNGIILL MLGWICFRAW QNQFMDLL