Gene Cyan8802_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1888 
Symbol 
ID8391203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1922189 
End bp1922932 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content41% 
IMG OID644979874 
ProductABC transporter related 
Protein accessionYP_003137620 
Protein GI257059732 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG TTATTAGACT CGATCAGGTT ACCCTATACC GAAGAACTCA AGAGGAGTTT 
TCCTACGATT TAAAGAAAAC CATCCTCACT TTTTTAGAAG GGAAGTATCG CCAACCCACA
AAAAAGTTAA TTCTTGATCA GATTAATTTT ACAGTAGAAG CGGGGGAAAA AATTGGCATT
ATTGGTGCCA ATGGTTCGGG AAAATCAACC TTACTCAAGG TGATCTGTGG TATTTTACAA
CCTTCCTCTG GTCAAGTGAG AGTCAGGGGA GATATTGCGC CTTTGATTGA ATTAGGGGCA
GGATTTGATC CAGAATTATC GGTTATTGAT AATATTATTC TGTATGGGGT CATGTTGGGC
TTTCCTCGCC AAGAAATGAA GGATCGAGTC ACCTCTATTT TAGAATTTGC TGAGTTAAAA
GACTATGCTT GGGCTCCTGT TAAAGCCCTT TCATCGGGGA TGACAGCACG TTTAGGGTTT
GCTATCGCCA CCGATGTAGA ACCCGATGTC TTAATCCTCG ATGAAGTGCT ATCAGTGGGG
GATGAAAGCT TTAAAAATAA ATGCCAAAGA CGAATGGATA AATTGTGGGG ACATAACACG
ACTATTCTAG TGGTTTCCCA CGGGCTAGAG TTTATTAAAC AGTCGTGCGA TCGCGCCATT
TGGTTAGATC GGGGTAAAAT TCGTTTTGCG GGCAGTACCG ATGAGACAAT TGATTGTTAT
CTAACGTCAG TTCAACAGAG TTAA
 
Protein sequence
MTEVIRLDQV TLYRRTQEEF SYDLKKTILT FLEGKYRQPT KKLILDQINF TVEAGEKIGI 
IGANGSGKST LLKVICGILQ PSSGQVRVRG DIAPLIELGA GFDPELSVID NIILYGVMLG
FPRQEMKDRV TSILEFAELK DYAWAPVKAL SSGMTARLGF AIATDVEPDV LILDEVLSVG
DESFKNKCQR RMDKLWGHNT TILVVSHGLE FIKQSCDRAI WLDRGKIRFA GSTDETIDCY
LTSVQQS