Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1876 |
Symbol | |
ID | 8391191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 1913231 |
End bp | 1913602 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644979862 |
Product | TPR repeat-containing protein |
Protein accession | YP_003137608 |
Protein GI | 257059720 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGAAGGT ATGAAGAGGC GATCGCTTCT TACGACAAAG GTTTAGAATT TAAACCCGAT GATGATGCTG CTTGGAATAA CCGAGGGATA GCGTTAGGGA ATTTGGGAAG GTATGAAGAG GCGATCGCAT CTTTTGACAA AGCTTTAGAA ATTAATCCTA ATAATGCTAA TATTTACTAC AATAAAGCTT GCAGTTATAG CTTACAAAAT AATCTAGAAT TAGCCATCCA AAACCTGCAA CAAGCGATTA AGTTAGATGA ACAATACAGA GAAATGGCAA AAACTGATCA AGACGTTGAT AACATTCGAG ATCATGAACT GTTTCAAACA TTAATTAACC TCTATACTTC AAATGGAAAA AACCATGAAT AA
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Protein sequence | MGRYEEAIAS YDKGLEFKPD DDAAWNNRGI ALGNLGRYEE AIASFDKALE INPNNANIYY NKACSYSLQN NLELAIQNLQ QAIKLDEQYR EMAKTDQDVD NIRDHELFQT LINLYTSNGK NHE
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