| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1855 |
|---|
| Symbol | |
|---|
| ID | 8391170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 1878700 |
|---|
| End bp | 1881318 |
|---|
| Gene Length | 2619 bp |
|---|
| Protein Length | 872 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644979841 |
|---|
| Product | diguanylate cyclase/phosphodiesterase with Chase sensor |
|---|
| Protein accession | YP_003137587 |
|---|
| Protein GI | 257059699 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.311227 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATAGTTA AGCTCCATCA GGCAATTCGT TCCCTAGTCG CTGCTGCTCA AAGCAACGGT
CAATCCTTTC GAGTCGTGGA AAATAGACCA GAAGCGAAGA GGAATTATCG TCCTAGATTT
TTAGTAGGAA GTTGGTTTTC CTATGTCCCG GCGATTTTAC TCTCAAGTGG TCTGGTAACT
TTATCATTAT TCGGAATTAA GCAATCTGGT CACTTACAAT TTTTGGAGTT AGTTGCCTAC
GATCAAATGG TGCAAATGAC TCCTAGTGAT GATCAAGATC CTCGTTTGTT GTTGATCGGC
ATCACAGAAC AAGATATTAA AAAACAAAAA CAATGGCCCC TATCTGATCA AGTCATTGCT
CAAGTCTTAA ACACTTTACA AACCTATCAG CCTCAAGTTA TTGGGTTAGA TATTTATCGA
GATGTCCCCT ATAAACCAGG GACAGAAGAT CTTTATAAAG CCCTTCAAGC TAACAACATT
GTTGTAGTTA AACAATTACC AACCGATAAC GATCAGGGCA TTGTGCCATT AGCTAACATC
CCTCCTAGCC GCATTGGGTT TAGCGATTTT GTCATTGATC CTGATAATGT CGTGCGCCGT
AATTTAATGT ATGGAGAATC ACCATCAGGA AAAGTTCAAG CGGTTTCTTT CGCGTTACAA
GTTAGTCTGA AATACCTGAA AAATCGGGGA TTCAATGTTT CGATTAAACC TGAATCTGAA
GCTCTAACCA TTGGTAATGT GCCTTTTACC CGTCTTAAAG TTGATTCTGG AGGGTATCAT
CTCCCTGAGA AGGAGGCGTG GGGATGGCAA AGTTTATTAA AATATCGTAG ACCCGACCTA
GCTCGACAAG TAACCCTACA ACAGGTACTC GATCAGGAGC TCGATCCCAA TTGGGTGAAA
GATAAAATTG TTTTGATTGG GGTAACAGCT TCTAGTGAAA AAGATACCTT TCCGACTCCC
TACAGTGCTA AACAAACGAA TAATTTTGAG ATGCCGGGTG TGATGATCCA CGGGCAAATG
GTCAGTCAAA TTCTAGGGAC TATTTTACAA GGAGAACAAC AATTATGGTT TTGGTCCCAA
TGGCTAGAGT GGCTTTGGGT TTGCGGTTGG GCTTTAGTCG GAGGAGTTTT AGTTTGGCGA
TTGAATGGAC TGTGGAGTTT AGGCGGTGCA GTCCTAATGG CTGGGGTTAG TGTTTGGGGG
ATTAGCTTTT TCGTGTTTAC CCAGGGGGGT TGGATTCCTT TGGTGCCTGG GGTTTTGGGT
TTATTGGCTA GTGGGGCGTT TGTTTTAGCC TATAAAGCGA TTTATCGGAC TTACCATGAT
CCCTTAACCG GGCTTCCCAA TCGGCGGTTA TTAATACGGC AAATTCAACA AGTCAATCGG
AGTCAGGGTT CAGAGTCTCA AAAGTTGATC GCTATCTTAT TTCTTGATTT TGACCGGTTT
AAAACGATTA ATGATGGTTT AGGGCATCTG GCGGGGGATC ATCTGCTGAT GCAAATTTCT
CGACGCTTAC AAGAACAATC TCAACCTCAG ATTCTGGTAG GACGGGTGGG AGGAGATGAA
TTTGCCTTAT GTTTAAACCA GATTAGCCAG GCTCAAGAAG TGACCGCTTT TGCTGATGCG
TTACAAAAAC ACTTAAGCCA ACCGTTTTAT TGGCAAAACC AAGAAATTTA TATTACCGCA
AGTATTGGCA TTGCCCTGGA GTGCGTCGGC CAGAATTTTC AGGCAGGGGA ATTATTGCGC
TATGCCGATA TTGCCATGTA TCGTGCCAAG GAGTTAGGGA CAGCCCGTCA TGAAGTCTTT
GTCGAGGGAA TGGACACCCA AGCAGTCGAA CGATGGCAAC TAGAAACCGA TCTACGGGCT
GGATTACAAA ATCAAGAATT TCAACTGTAT TATCAACCGA TTATTTCGTT AAAAACCGGA
AAAATTGCCG GATTTGAAGC CCTAGTGCGT TGGGTGTCTA ATAAACGGGG TTTTGTTTCC
CCGGGCGATT TTATTCCCCT AGCCGAAGAA ACTGGGTTAA TTGTTCCTTT AGGACAATGG
ATTTTACAGG AAGCTTGTCA GCAAATTCAA CGTTGGCATG AACAGTTTCC CCAGATTGTT
CCTTTGATTA TGAGTGTGAA TCTTTCTGGC CGCCAGTTTA CCCAACCGGA TTTAGTCAAG
CAAATTCAAA AAATTCTAGA TGAGGTCAAT ATTGAGGGCG ATCGCCTTAA ACTGGAAATC
ACCGAAAGTA TGATGATGAA TGATGTGGAA ACAGCTATTG ATCTTCTCCG GCGACTCAAG
GGGTTAGGAT TACGGTTGAG TATCGATGAT TTTGGTACAG GTTATTCTTC TTTGAGTTAT
CTACATCGGT TTCCGGTAGA TACCCTCAAG GTTGATCGTT CGTTTGTGGG ACGGATGGAA
GAAGGAAGTG ATAGTGAAAA GTATATTCAA ATTGTGCGAA CGATTATTTC TTTGGGTCAT
AATTTGGATT TAGATGTGAT TGCCGAAGGG ATCGAAACAG AGGCTCAAGT TAGAGTCCTT
GAATCCCTCA ATTGTGAATA CGGACAAGGT TATTATTTTT CTAAGCCGTT ATCAGCCAAG
GATGCTGAAG AGTTACTCAA TCAAGACAAG GAATGGTAG
|
|---|
| Protein sequence | MIVKLHQAIR SLVAAAQSNG QSFRVVENRP EAKRNYRPRF LVGSWFSYVP AILLSSGLVT
LSLFGIKQSG HLQFLELVAY DQMVQMTPSD DQDPRLLLIG ITEQDIKKQK QWPLSDQVIA
QVLNTLQTYQ PQVIGLDIYR DVPYKPGTED LYKALQANNI VVVKQLPTDN DQGIVPLANI
PPSRIGFSDF VIDPDNVVRR NLMYGESPSG KVQAVSFALQ VSLKYLKNRG FNVSIKPESE
ALTIGNVPFT RLKVDSGGYH LPEKEAWGWQ SLLKYRRPDL ARQVTLQQVL DQELDPNWVK
DKIVLIGVTA SSEKDTFPTP YSAKQTNNFE MPGVMIHGQM VSQILGTILQ GEQQLWFWSQ
WLEWLWVCGW ALVGGVLVWR LNGLWSLGGA VLMAGVSVWG ISFFVFTQGG WIPLVPGVLG
LLASGAFVLA YKAIYRTYHD PLTGLPNRRL LIRQIQQVNR SQGSESQKLI AILFLDFDRF
KTINDGLGHL AGDHLLMQIS RRLQEQSQPQ ILVGRVGGDE FALCLNQISQ AQEVTAFADA
LQKHLSQPFY WQNQEIYITA SIGIALECVG QNFQAGELLR YADIAMYRAK ELGTARHEVF
VEGMDTQAVE RWQLETDLRA GLQNQEFQLY YQPIISLKTG KIAGFEALVR WVSNKRGFVS
PGDFIPLAEE TGLIVPLGQW ILQEACQQIQ RWHEQFPQIV PLIMSVNLSG RQFTQPDLVK
QIQKILDEVN IEGDRLKLEI TESMMMNDVE TAIDLLRRLK GLGLRLSIDD FGTGYSSLSY
LHRFPVDTLK VDRSFVGRME EGSDSEKYIQ IVRTIISLGH NLDLDVIAEG IETEAQVRVL
ESLNCEYGQG YYFSKPLSAK DAEELLNQDK EW
|
|---|
| |