Gene Cyan8802_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1855 
Symbol 
ID8391170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1878700 
End bp1881318 
Gene Length2619 bp 
Protein Length872 aa 
Translation table11 
GC content43% 
IMG OID644979841 
Productdiguanylate cyclase/phosphodiesterase with Chase sensor 
Protein accessionYP_003137587 
Protein GI257059699 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.311227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAGTTA AGCTCCATCA GGCAATTCGT TCCCTAGTCG CTGCTGCTCA AAGCAACGGT 
CAATCCTTTC GAGTCGTGGA AAATAGACCA GAAGCGAAGA GGAATTATCG TCCTAGATTT
TTAGTAGGAA GTTGGTTTTC CTATGTCCCG GCGATTTTAC TCTCAAGTGG TCTGGTAACT
TTATCATTAT TCGGAATTAA GCAATCTGGT CACTTACAAT TTTTGGAGTT AGTTGCCTAC
GATCAAATGG TGCAAATGAC TCCTAGTGAT GATCAAGATC CTCGTTTGTT GTTGATCGGC
ATCACAGAAC AAGATATTAA AAAACAAAAA CAATGGCCCC TATCTGATCA AGTCATTGCT
CAAGTCTTAA ACACTTTACA AACCTATCAG CCTCAAGTTA TTGGGTTAGA TATTTATCGA
GATGTCCCCT ATAAACCAGG GACAGAAGAT CTTTATAAAG CCCTTCAAGC TAACAACATT
GTTGTAGTTA AACAATTACC AACCGATAAC GATCAGGGCA TTGTGCCATT AGCTAACATC
CCTCCTAGCC GCATTGGGTT TAGCGATTTT GTCATTGATC CTGATAATGT CGTGCGCCGT
AATTTAATGT ATGGAGAATC ACCATCAGGA AAAGTTCAAG CGGTTTCTTT CGCGTTACAA
GTTAGTCTGA AATACCTGAA AAATCGGGGA TTCAATGTTT CGATTAAACC TGAATCTGAA
GCTCTAACCA TTGGTAATGT GCCTTTTACC CGTCTTAAAG TTGATTCTGG AGGGTATCAT
CTCCCTGAGA AGGAGGCGTG GGGATGGCAA AGTTTATTAA AATATCGTAG ACCCGACCTA
GCTCGACAAG TAACCCTACA ACAGGTACTC GATCAGGAGC TCGATCCCAA TTGGGTGAAA
GATAAAATTG TTTTGATTGG GGTAACAGCT TCTAGTGAAA AAGATACCTT TCCGACTCCC
TACAGTGCTA AACAAACGAA TAATTTTGAG ATGCCGGGTG TGATGATCCA CGGGCAAATG
GTCAGTCAAA TTCTAGGGAC TATTTTACAA GGAGAACAAC AATTATGGTT TTGGTCCCAA
TGGCTAGAGT GGCTTTGGGT TTGCGGTTGG GCTTTAGTCG GAGGAGTTTT AGTTTGGCGA
TTGAATGGAC TGTGGAGTTT AGGCGGTGCA GTCCTAATGG CTGGGGTTAG TGTTTGGGGG
ATTAGCTTTT TCGTGTTTAC CCAGGGGGGT TGGATTCCTT TGGTGCCTGG GGTTTTGGGT
TTATTGGCTA GTGGGGCGTT TGTTTTAGCC TATAAAGCGA TTTATCGGAC TTACCATGAT
CCCTTAACCG GGCTTCCCAA TCGGCGGTTA TTAATACGGC AAATTCAACA AGTCAATCGG
AGTCAGGGTT CAGAGTCTCA AAAGTTGATC GCTATCTTAT TTCTTGATTT TGACCGGTTT
AAAACGATTA ATGATGGTTT AGGGCATCTG GCGGGGGATC ATCTGCTGAT GCAAATTTCT
CGACGCTTAC AAGAACAATC TCAACCTCAG ATTCTGGTAG GACGGGTGGG AGGAGATGAA
TTTGCCTTAT GTTTAAACCA GATTAGCCAG GCTCAAGAAG TGACCGCTTT TGCTGATGCG
TTACAAAAAC ACTTAAGCCA ACCGTTTTAT TGGCAAAACC AAGAAATTTA TATTACCGCA
AGTATTGGCA TTGCCCTGGA GTGCGTCGGC CAGAATTTTC AGGCAGGGGA ATTATTGCGC
TATGCCGATA TTGCCATGTA TCGTGCCAAG GAGTTAGGGA CAGCCCGTCA TGAAGTCTTT
GTCGAGGGAA TGGACACCCA AGCAGTCGAA CGATGGCAAC TAGAAACCGA TCTACGGGCT
GGATTACAAA ATCAAGAATT TCAACTGTAT TATCAACCGA TTATTTCGTT AAAAACCGGA
AAAATTGCCG GATTTGAAGC CCTAGTGCGT TGGGTGTCTA ATAAACGGGG TTTTGTTTCC
CCGGGCGATT TTATTCCCCT AGCCGAAGAA ACTGGGTTAA TTGTTCCTTT AGGACAATGG
ATTTTACAGG AAGCTTGTCA GCAAATTCAA CGTTGGCATG AACAGTTTCC CCAGATTGTT
CCTTTGATTA TGAGTGTGAA TCTTTCTGGC CGCCAGTTTA CCCAACCGGA TTTAGTCAAG
CAAATTCAAA AAATTCTAGA TGAGGTCAAT ATTGAGGGCG ATCGCCTTAA ACTGGAAATC
ACCGAAAGTA TGATGATGAA TGATGTGGAA ACAGCTATTG ATCTTCTCCG GCGACTCAAG
GGGTTAGGAT TACGGTTGAG TATCGATGAT TTTGGTACAG GTTATTCTTC TTTGAGTTAT
CTACATCGGT TTCCGGTAGA TACCCTCAAG GTTGATCGTT CGTTTGTGGG ACGGATGGAA
GAAGGAAGTG ATAGTGAAAA GTATATTCAA ATTGTGCGAA CGATTATTTC TTTGGGTCAT
AATTTGGATT TAGATGTGAT TGCCGAAGGG ATCGAAACAG AGGCTCAAGT TAGAGTCCTT
GAATCCCTCA ATTGTGAATA CGGACAAGGT TATTATTTTT CTAAGCCGTT ATCAGCCAAG
GATGCTGAAG AGTTACTCAA TCAAGACAAG GAATGGTAG
 
Protein sequence
MIVKLHQAIR SLVAAAQSNG QSFRVVENRP EAKRNYRPRF LVGSWFSYVP AILLSSGLVT 
LSLFGIKQSG HLQFLELVAY DQMVQMTPSD DQDPRLLLIG ITEQDIKKQK QWPLSDQVIA
QVLNTLQTYQ PQVIGLDIYR DVPYKPGTED LYKALQANNI VVVKQLPTDN DQGIVPLANI
PPSRIGFSDF VIDPDNVVRR NLMYGESPSG KVQAVSFALQ VSLKYLKNRG FNVSIKPESE
ALTIGNVPFT RLKVDSGGYH LPEKEAWGWQ SLLKYRRPDL ARQVTLQQVL DQELDPNWVK
DKIVLIGVTA SSEKDTFPTP YSAKQTNNFE MPGVMIHGQM VSQILGTILQ GEQQLWFWSQ
WLEWLWVCGW ALVGGVLVWR LNGLWSLGGA VLMAGVSVWG ISFFVFTQGG WIPLVPGVLG
LLASGAFVLA YKAIYRTYHD PLTGLPNRRL LIRQIQQVNR SQGSESQKLI AILFLDFDRF
KTINDGLGHL AGDHLLMQIS RRLQEQSQPQ ILVGRVGGDE FALCLNQISQ AQEVTAFADA
LQKHLSQPFY WQNQEIYITA SIGIALECVG QNFQAGELLR YADIAMYRAK ELGTARHEVF
VEGMDTQAVE RWQLETDLRA GLQNQEFQLY YQPIISLKTG KIAGFEALVR WVSNKRGFVS
PGDFIPLAEE TGLIVPLGQW ILQEACQQIQ RWHEQFPQIV PLIMSVNLSG RQFTQPDLVK
QIQKILDEVN IEGDRLKLEI TESMMMNDVE TAIDLLRRLK GLGLRLSIDD FGTGYSSLSY
LHRFPVDTLK VDRSFVGRME EGSDSEKYIQ IVRTIISLGH NLDLDVIAEG IETEAQVRVL
ESLNCEYGQG YYFSKPLSAK DAEELLNQDK EW