| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1804 |
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| Symbol | aksA |
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| ID | 8391118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 1837142 |
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| End bp | 1838275 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644979791 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_003137538 |
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| Protein GI | 257059650 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.248847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACTACG TTAACATTAA CGATACCACC CTGCGTGATG GAGAACAAGC GGCGGGCATT
GTCTTTACCC CTGACGAAAA AATCTCCTTG GCTGTCTTGA TGGATGCCAT GGGTATTCCT
GAATTGGAAG TCGGTATCCC TGCCATGGGA GGCAGCGAAG CCCAAGCCAT TACTACTATT
GCCAAATTAG GCTTAAAAAC TGACCTTTTA GGTTGGAATC GAGCGAATCG CTCCGATATT
GAGGCTTCTA TCGCCTGTGG ACTGAGAAGG GTTCATATTT CCATCCCCGT CTCTGAAGTC
CAAATTCAAG CCAAGTTTCA AGGGAATTGT CGTGTTGTCT TAGAACGGCT ACAGGATACT
CTGAATTTTG CCTTGGATCG CGGTTTATTT GTCTCTGTCG GGGCGGAAGA CTCCTCTAGG
GCTGTCGAAT CATTTTTACT CGATGTGGCG GGTTCTGCCC AAGATTGGGG GGCTTCTCGT
TTTCGCTTTT GCGATACGGT GGGCATTCTC GATCCGGCAA CCACCACCGA AAAAGTCGGT
AAATTGGTTC AGTCTGTCTC TATTCCCATC GAAATGCACA CCCACAATGA TTTTGGCCTA
GCCACGGCTA ATGCTTTAGC GGGGTTACAA GCGGGGGCAA CTTCCGTTAA TACCACCGTT
AACGGCTTAG GAGAAAGGGC GGGCAATGCA GCCCTTGAGG AGATGGTCAT GGCTTTGAAG
CAACTGTACA AAGTCAAATT GGACATTAAT ACCCGTCAGT TGCGGGAATT ATCACAATTG
GTCGTCACAG CTTCGGGGTA TCAACTGCCC CCGTGGAAGG CGATCGTTGG AGATAATGCC
TTTGCCCATG AGTCGGGTAT TCATGCCCAT GGAGTCCTGA AAAACCCTCA AACCTATGAA
CCCTTTGCCC CTGAAGAAAT TGGGATGGAA AGGCGTTTAG TGGTGGGCAA ACATTCTGGC
CGGCATTTAG TCTCTAATGT ACTCGGACAA CATGGCATTA CTTTAGACCG TGAGGAAGCC
CAATTTGTTC TAGAGGCGGT GCGAAATTTG TCGGTTCAGA TGAAACGCAG TTTAACGGTT
GATGAATTAC TTGAGTTAGT ACCCAATAGG AGAGTGTCCC ATGGGATTAT ATAA
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| Protein sequence | MDYVNINDTT LRDGEQAAGI VFTPDEKISL AVLMDAMGIP ELEVGIPAMG GSEAQAITTI
AKLGLKTDLL GWNRANRSDI EASIACGLRR VHISIPVSEV QIQAKFQGNC RVVLERLQDT
LNFALDRGLF VSVGAEDSSR AVESFLLDVA GSAQDWGASR FRFCDTVGIL DPATTTEKVG
KLVQSVSIPI EMHTHNDFGL ATANALAGLQ AGATSVNTTV NGLGERAGNA ALEEMVMALK
QLYKVKLDIN TRQLRELSQL VVTASGYQLP PWKAIVGDNA FAHESGIHAH GVLKNPQTYE
PFAPEEIGME RRLVVGKHSG RHLVSNVLGQ HGITLDREEA QFVLEAVRNL SVQMKRSLTV
DELLELVPNR RVSHGII
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