Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1682 |
Symbol | lpxB |
ID | 8390994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 1721734 |
End bp | 1722894 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644979672 |
Product | lipid-A-disaccharide synthase |
Protein accession | YP_003137421 |
Protein GI | 257059533 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0763] Lipid A disaccharide synthetase |
TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATCT TTATTAGTAC GGGGGAAGTT TCTGGTGACT TACAGGGGTC GCTGTTAGTC GAGTCGCTTT ATCAACGGGC AGAAGCTAGG GGGATACCGC TAGAAATCCT GGCGTTAGGG GGCGATCGCA TGGCAGCGGC CGGTGCTAAA CTGTTGGGAA ATACGGCGGC GATCGGTTCT ATTGGTATTG TGGAGTCCCT CCCGTTTATT ATTCCCACTT GGTTGATGCA GCGTCGGGTT AAGCAGTATT TACGGGAGAA TCCTCCTGAT ATTTTGATTC TCATCGATTA TATGGGTCCA AATGCGGCTT TTGGCCAATA TGCGCGGAAA CATCTCCCCC AAGTGCCGAT TATTTATTAT ATTGCCCCTC AATCTTGGGT ATGGGCTCCC AATAGTAAAA CGATTCAACA ATTTGCTCAT ATTACTGACC TTCTGTTGGC GATTTTCCCT GAAGAAGCGA GATTTTTTGA AGAAAAAGGG GTTTCGGTTA AATGGGTGGG TCATCCCTTG CTCGATCGCA TGGCAAAGGC TCCCAGTCGA GAGGTGGCGC GTCAACGGTT AAATTTACAT TCGGATCAGT TGATTGTCGC GCTTTTTCCG GCTTCGCGCT ATCAGGAGTT AAAGTTTCAT CTGCCGTTGA TGTGTCAAGC AGCAGCCAAA TTACAGGAAA AAATCCCTAA TTTACACTTT TTGCTGCCTG TTTCCTTGAG TGAGTATCGC AGTACCATTG AAGAGACGGT GAAAGCCTAT CCGTTTTCGG TAACGTTGTT GGATGGTCAA GCGTTGGATG TGATGGCGGC GGCAGATTTT GCGATCGCTA AGTCGGGAAC GGTGAATTTA GAGTTAGCTT TGCTAAAAAT TCCCCAATTA GTGTTATGTT TAGTCAATCC TTTAACGATG TGGATTGCTC GCAATATTCT TAAGTTTTCT ATTCCCTATA TGTCACCGCC AAATTTAGTG GTGATGGAGG CAATTATTCC CGAATTGTTG CAGGAAGAAG CAACTATAGA GCGCATTGTT CAAGAGTCTT TGGATTTATT GTTGAATACA GAACGCCGTC AAAAAACCTT GGCAGATTAT GAACAAATGT CTACTCTGTT AGGGGAGGTA GGAGTCTGCG ATCGTGTGGC TAATGAAATT TTAGATTATT CTAAAAGTTA G
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Protein sequence | MRIFISTGEV SGDLQGSLLV ESLYQRAEAR GIPLEILALG GDRMAAAGAK LLGNTAAIGS IGIVESLPFI IPTWLMQRRV KQYLRENPPD ILILIDYMGP NAAFGQYARK HLPQVPIIYY IAPQSWVWAP NSKTIQQFAH ITDLLLAIFP EEARFFEEKG VSVKWVGHPL LDRMAKAPSR EVARQRLNLH SDQLIVALFP ASRYQELKFH LPLMCQAAAK LQEKIPNLHF LLPVSLSEYR STIEETVKAY PFSVTLLDGQ ALDVMAAADF AIAKSGTVNL ELALLKIPQL VLCLVNPLTM WIARNILKFS IPYMSPPNLV VMEAIIPELL QEEATIERIV QESLDLLLNT ERRQKTLADY EQMSTLLGEV GVCDRVANEI LDYSKS
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