Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1643 |
Symbol | |
ID | 8390955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 1682692 |
End bp | 1683381 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644979634 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003137383 |
Protein GI | 257059495 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTAG AGAAAAGGCA AATTCTTGTT GTAGGAGCTA GTCGGGGTAT TGGTGCTGCT GTTGCTCAAC ATTTTGCTCA AAAAGGTGAG AATGTCATCT CTGTTTCAAG AAGTCAACCT ATTGCAGGCA AGTGGATTCA AGCGGATATT TCCACAGCAC AAGGAATACA GTCAGTTGTT GATCAGGTTG GCGAATCTCG ATTGGATGCA CTGCTATTTA TGGGGGGAGT GTGGGAAGAT GGCGCATTTA CCGATCAATA TGACTTCTTG CAAAGCTCTG ATCAAGAAAC TCGTTATGTG ATAGCGGTCA ATACAATTGC TCCTATCGAA CTCACTAAAA AACTCACTAA AAATCTTGTT GAATCAGACA ACCCCAGAAC TATATTTATT GGCTCATTAT CTGGTCTAGA TAACGCCGCG TCGATCGAGG TAGCTAATAC AGCATCAAAG TTTGGATTAA GAGGTGCAGC ACAAGCCTTA AGTATAGCTC TGTATGATTA CAAGATTGGT GTTACAGTTA TTAATCCTGG AAATGTCGCC ACTGAAGAAG TGCTCGCAGA TATAAAAGAA GGAAGATTTG GGCAGCAAGT TCCGATCCCT CTTGCGGATA TAATTTCTTC AATTGATTGG ATTCTAACGC TCTCAAATGC TGTAAATATC GCAGAGATCA ATATGCAACA GAAGGGCTGA
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Protein sequence | MQLEKRQILV VGASRGIGAA VAQHFAQKGE NVISVSRSQP IAGKWIQADI STAQGIQSVV DQVGESRLDA LLFMGGVWED GAFTDQYDFL QSSDQETRYV IAVNTIAPIE LTKKLTKNLV ESDNPRTIFI GSLSGLDNAA SIEVANTASK FGLRGAAQAL SIALYDYKIG VTVINPGNVA TEEVLADIKE GRFGQQVPIP LADIISSIDW ILTLSNAVNI AEINMQQKG
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