Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1588 |
Symbol | |
ID | 8390900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 1628422 |
End bp | 1629747 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644979582 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_003137332 |
Protein GI | 257059444 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0902999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCCT CTCCTAGTTT AGCTGCCATT CCGCCGATTG AAATTGCCCT CGCGCAGTAT CAATTAGCCC TTGCTGCTTG GGAAAATGAA AGCAACCAAT CAACTGAAAA TGCTTTAAAA ATTCTCACCA CCAGAGAGAC AGTACAAAGA CTATTAGACG TTGAAAAAAA AGTTCCTTCA ACGATTTTAC AAACCTTAGT AGAATTAGAT AAAAAGTTAG AAAATAACGC AGTTTCTTTA ACTCAGATTC TTGATTTAGC CGTCTATCGT CATAGCCTTT CCATTTCCCC TCAAGGGTGG TGGTGGAGTT TAGATGAAAC AGTCAAAGAA AAAGAATTAG CAGGACAGCT ATCTTGGCTG TGGAAAGGAG CTAGAATTGG CGTTTGGACA ATCAATTTGG GATTATTAGG AACCTTAGCA ACACGCTTTT TTAGTGGTGC ATCGGGGTTA GGAGAAATGT TAGCGATCGC CTTACCGAGT ATTTTAGTCT TATTACAAGC CAATAATGAA CTCACTTCTG CGGGACGCGA AGGATTTAAT CGACTCTGCG ATCGCTTAAA AATTCCTAAA CATTTACAGG AAGAAGCAAG ATTAATTCCA ACGGTTTCTT TATTTGTCAT TCTATTAGTT ATTTGGTTTC TGCAACCGCA ATTTTCTCAA GGGATGAACC AAGAAGGAAG ACGAGCCCAA CAACGCGGAC AATTAACTCA AGCAGAACAA CATTATTTAA AAGCCATTGC TCTATCTGCT AATAATTTAG ATGCGACTTA TAATTTAGGC AATCTCTATG AAGAATTACA AAACTTTGAT AATGCTGTCA AATACTATAT TATTGCAGCT AAAGGAGGAA TCCCAGAAGC TTATAACAAT CTTGCCCGTC TTTATATTCG ACAAAATAAA TATCCAGAAG CCGTCATTTT ACTCAAAGAA GGGTTAAGCT TAATTGATAC CGAAGAACAA AAAGAAAGTC CCCCTCCTCC TAATTTGGGA GAAGTAAAAT ACAGTCTCTT AAAAAACTTA GGATGGGCAA AATTGCAGCA ATCTCAATCG GAAGAAGCTC AAGGTTATCT CTTAGCAGCC ATTGGAATTG CCAGTGATCC CCAAATTCAG CCCTATATTC CCAATCCAGG GGCGGCTCAT TGCCTTTTAG CCCAAGTATT AGAATTACCC CCACAACAGC TTTCTTTGTC CCTAGAACAA TGGCAACAGT GCTATACTTT GATTGAGAAA CGGTTAGCTG CTGGAGAAAT TCGCAATCCA GAAGAAGAAA CTTGGTTTTC TTTAGCTAAA CAAAAGTTAA CTTCTCAAGG AAATTCAACC CCATGA
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Protein sequence | MTSSPSLAAI PPIEIALAQY QLALAAWENE SNQSTENALK ILTTRETVQR LLDVEKKVPS TILQTLVELD KKLENNAVSL TQILDLAVYR HSLSISPQGW WWSLDETVKE KELAGQLSWL WKGARIGVWT INLGLLGTLA TRFFSGASGL GEMLAIALPS ILVLLQANNE LTSAGREGFN RLCDRLKIPK HLQEEARLIP TVSLFVILLV IWFLQPQFSQ GMNQEGRRAQ QRGQLTQAEQ HYLKAIALSA NNLDATYNLG NLYEELQNFD NAVKYYIIAA KGGIPEAYNN LARLYIRQNK YPEAVILLKE GLSLIDTEEQ KESPPPPNLG EVKYSLLKNL GWAKLQQSQS EEAQGYLLAA IGIASDPQIQ PYIPNPGAAH CLLAQVLELP PQQLSLSLEQ WQQCYTLIEK RLAAGEIRNP EEETWFSLAK QKLTSQGNST P
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