Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1428 |
Symbol | |
ID | 8390740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 1455052 |
End bp | 1456869 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644979430 |
Product | malto-oligosyltrehalose trehalohydrolase |
Protein accession | YP_003137180 |
Protein GI | 257059292 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0818981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTTA GTGCAAATTA TGACGGCAAT AGCGATTGTC AATTTACCCT TTGGGCTCCT AAAGTCCGTC AAGTAGACCT TAAAATTATC ACCCCAACAG AACAGATCAT CCCAATGGAG TGTGATGAAA AAGGATACTG GAAAACTCAC CTAAAAATCG CTCCAGGTAG CTTATATTGT TATCAACTAG ACTCAGAACA AACTCGACCA GATCCCGCGT CTTACTCTCA ACCAAAAGGG GTTCATGGTC CTTCTGAAAT TATCGATCAT CATCGCTTTA ATTGGACTGA TCATCAGTGG AAAAATCTCC CGTTTACTGA TTTTGTTATC TATGAGTTGC ACGTCGGAAC TTTCACCCCA GAAGGAACAC TCACCGCAAT TATTCCCCGT TTAAGTCAAC TCAAAGCCGT AGGAATTACT GCCATTGAAT TAATGCCATT ATCCCAATTT CCAGGCGATC GCAATTGGGG TTATGATGGC GTTTATCCCT TTGCTGTTCA ACAGTCCTAC GGAGGAGTAG ACGGACTCAA AGAACTGGTT AATGCTTGTC ATCAAGAAGG ATTAGCCGTC ATCCTCGATG TAGTTTACAA TCATTTAGGA CCAGAAGGCA ACTATACCGC CAATTTTGCT CCCTATTTTA GTCACAAATA TCAAACACCG TGGGGAAATG CTCTCAATTT TGATGATGCC TACAGTTATG GGGTGCGTAA CTTTTTTATT GAAAATGCGC TATATTGGCT AAGGGACTAT CATATTGATG GCTTAAGATT GGATGCTATT CATGGAATTT ATGACCAAAG TGCCAAGCAT TTTTTAGCCG AATTAAGAGA AAAAGTTGAC CAGCTTTCTC AACAGTGCGA TCGCCCCTTT TATTTAATAG CAGAAAGTGA CTTAAACGAT GGTCGTATCC TTCGTCCTTT GGAAGTAGGG GGGTATGGGA TGGATGCTCA ATGGAGTGAT GATTTTCACC ACTGTTTACA TACCTTATTA ACGGGAGAAA ATCAAGGCTA TTATCAAGAT TTTGGACGCT GTGATCACTT AACACAAGCC TTTAAACAGA GTTTTGTCTA TAGTGGAGAT TATTCCCCCC ATCGTCAACG TTATCATGGC GGATCAGTCA GCGATCGCCC CTCGTCTCAA TTCGTGGTTT ATGCCCAAAA CCACGACCAA ATTGGTAATC GAATGCTGGG GGAAAGATTA TCAAACTTAG TCTCGTTTAA TGCCCTAAAA TTAGCCGCAG GAACGGTTAT TTTATCCCCC TTTATTCCCC TGTTTTTTAT GGGGGAAGAA TACGGAGAAG AAACCCCTTT TTTATACTTT ATTAGTCACA CCGATTCTAA CTTAGTCGAA GCAGTCAGAC AAGGAAGAAA AGAAGAATTT AAAAGTTTTC AATGGCAAGG AGAACCCCCT GATCCCTATG CGCTAGAAAC CTTTAAACAA TGTCAATTAC AATGGCATAA AAGAGATGAA GGAAAACATA AAATTTTGTT AAAATTTCAC CAAAAATTGT TGCGAATGCG ACGGACTATT CCTGCTTTAA AAAATTGTAA TCAAGACCAC TTATCGGTTA AAACTTGGGA AAATGAACGG TTAATCTGTC TTCATCGATG GTTCCCAAAT AGTCAAGTTT TCTGTATCAT GAACTTTAAT CAAGAAACCA TTACCGTGAC GATTGAACCA CCACAGGGAA ACTGGATAAA ACAATTAGAT TCTAATGATA GCGAATGGCT TGGAAAAGGG TCAACTTTAC CTGAATCTTT CCATCTAGAA CAAACGTTAA TTATCCCAGA AAGCAGTTTA ATTGTTTATC AAATTTAG
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Protein sequence | MKLSANYDGN SDCQFTLWAP KVRQVDLKII TPTEQIIPME CDEKGYWKTH LKIAPGSLYC YQLDSEQTRP DPASYSQPKG VHGPSEIIDH HRFNWTDHQW KNLPFTDFVI YELHVGTFTP EGTLTAIIPR LSQLKAVGIT AIELMPLSQF PGDRNWGYDG VYPFAVQQSY GGVDGLKELV NACHQEGLAV ILDVVYNHLG PEGNYTANFA PYFSHKYQTP WGNALNFDDA YSYGVRNFFI ENALYWLRDY HIDGLRLDAI HGIYDQSAKH FLAELREKVD QLSQQCDRPF YLIAESDLND GRILRPLEVG GYGMDAQWSD DFHHCLHTLL TGENQGYYQD FGRCDHLTQA FKQSFVYSGD YSPHRQRYHG GSVSDRPSSQ FVVYAQNHDQ IGNRMLGERL SNLVSFNALK LAAGTVILSP FIPLFFMGEE YGEETPFLYF ISHTDSNLVE AVRQGRKEEF KSFQWQGEPP DPYALETFKQ CQLQWHKRDE GKHKILLKFH QKLLRMRRTI PALKNCNQDH LSVKTWENER LICLHRWFPN SQVFCIMNFN QETITVTIEP PQGNWIKQLD SNDSEWLGKG STLPESFHLE QTLIIPESSL IVYQI
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