| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1351 |
|---|
| Symbol | |
|---|
| ID | 8390663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 1375151 |
|---|
| End bp | 1376746 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644979358 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_003137108 |
|---|
| Protein GI | 257059220 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000851094 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTGC CCCGTTTATT GTTTCTTGTG ATTGGTTTGA GTCTGATTCT TGGACTTATT
ATTTGGCTAA TTAATTCTAT TTATCGTCTT TATATTCAAG TTTCTTTTAC AGCCCCTTTA
TTAGCTAATC TTCTTGTTCT TTTAATTCTT GGATTATTGG GATTGCTAAT TTATGCGTTT
ATTTATTATT TTAATTTAAG TACATCTAAG AAAACCCGTA GACAAGATCG CCGTAATCTT
AATTTTAAAC TCCCTGAACA AAAGACAGAA GCTGCCCAAG AAACCCTTAA AGCAGTGCGC
CGTCAAGTGC AACAAATTCA AGATAAAGTG ACTCAAAAAG CTTTATTAAA TCGTTCCCAA
GAAATTGAAG CTAGTTTAAC CAGGGGGGAA CTGAAAGTCG TCGTTTTCGG TACAGGTTCA
GCCGGAAAAA CGTCTTTAAT TAATGCTTTA ATTGGGGAAA TGGTTGGCAA TGTAGAAGCA
ACGATGGGAA CCACTCAAAT TGGAGAAACC TATCGCTTGA AATTACGGGG AGTATCGCAG
GAAATTTTGA TTACAGATAC CCCAGGAATT TTGGAAGCTG GAGTTGAGGG AACACAGCGA
GAAAAGTTAG CAAGACAGTT AGCAACGGAA GCGGATTTAC TATTATTTGT GGTTGATAAT
GATCTCCGTC AATCTGAATA TGATCCTCTA CAAATTTTAG CTAAAATTGG TAAGCGATCG
CTGCTTATTT TTAATAAAAT TGATCTGTAT ACTGAAGATG AAATCAGCTT AATCAAACAA
CAATTACAAG AAAGAGTCAA GGATTTAATC GGGGAATCTG ATCTTATTTT AATTGCAGCA
AATCCTCAAC CTTTTGAAGT AGAAACGGGA AAAATTATTA AAGCAGAACC CGATATCATT
CCCTTGATTA AACGATTAGC TGTTGTCTTA CGCGCGGAGG GAGAAGATTT AATTGCCGAT
AACATTTTAT TGCAATCTCA ACGCTTAGGA GAAGAAGCCC GAAAAATGAT TGATCGTCAA
CGATCTCGGC AAGCGGATAA AATTATTGAT CGCTATCAAT GGATTGGGGC AGGAGTCATT
GCTGTAACGC CTTTACCTGT GATAGATATG TTGGCAACCG CAGCCGTTAA TGCCCAAATG
GTAATAGAAA TTGGGCGAAT TTATGGGTGT GAATTAAATA GCGATCGCGG TAAAGAATTG
GCTTTTTCGT TAGGCAAAAC TCTAGTCAGT CTAGGCGTTG TTAAAGGGGC AGTAGATTTG
TTAAGTAAAG CCCTACAATT AAACGTCGCA ACCTATCTGG TTGGTAAGGT CATTCAAGGA
GTAACCGCAG CCTATTTAAC CCGTATTGCT GGTAAAAGTT TTGTGGAATA TTTTCGTCAA
GATCAAGACT GGGGAGATGG AGGCATTACG GAAGTGGTAC AGCGTCAGTT TCAACTCAGT
CGCAAAGATG AATTTATTAA AGGATTTGTT AAAGATGCGA TCGCTAAAGT CGTTGAACCG
TTAACAGATA CTTGGCAAGA AGAAGAAAAG GTAGACTTAG AATTAACGCC AGAACCCCTT
CAACAACAAG CTGTTTTAGA AGAAGATGAT TGGTAA
|
|---|
| Protein sequence | MPLPRLLFLV IGLSLILGLI IWLINSIYRL YIQVSFTAPL LANLLVLLIL GLLGLLIYAF
IYYFNLSTSK KTRRQDRRNL NFKLPEQKTE AAQETLKAVR RQVQQIQDKV TQKALLNRSQ
EIEASLTRGE LKVVVFGTGS AGKTSLINAL IGEMVGNVEA TMGTTQIGET YRLKLRGVSQ
EILITDTPGI LEAGVEGTQR EKLARQLATE ADLLLFVVDN DLRQSEYDPL QILAKIGKRS
LLIFNKIDLY TEDEISLIKQ QLQERVKDLI GESDLILIAA NPQPFEVETG KIIKAEPDII
PLIKRLAVVL RAEGEDLIAD NILLQSQRLG EEARKMIDRQ RSRQADKIID RYQWIGAGVI
AVTPLPVIDM LATAAVNAQM VIEIGRIYGC ELNSDRGKEL AFSLGKTLVS LGVVKGAVDL
LSKALQLNVA TYLVGKVIQG VTAAYLTRIA GKSFVEYFRQ DQDWGDGGIT EVVQRQFQLS
RKDEFIKGFV KDAIAKVVEP LTDTWQEEEK VDLELTPEPL QQQAVLEEDD W
|
|---|
| |