| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1339 |
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| Symbol | |
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| ID | 8390651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 1364028 |
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| End bp | 1365938 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644979347 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003137097 |
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| Protein GI | 257059209 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000323872 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATTGCC TGTCTTGGTT CTCTGAAGGC TCAAAATTGA TTTTCTTAGG ATTATTTGCT
TTAATTTTGG CTATTTCTCC TATTTCAATT TTGGCTCAAA ATCCTATTCT CAACTCTACA
GAAAAAGCTC CCATTGTTGT CGATGGGAGA GTGTTATTTG AAGTGGGATC AATTAGCAAT
TTTAGCGCAC AACAGCGAGC TAGTATTATT AATGATATCT TAGCCGAAGA AGTGCGATCG
CCTGACCCCG TGGATGTGGT TATCTTTGAT GAAAATCAAC GAACGGTTAT TCGTAATCAA
GCTACAAAAC GTCATTTATT GACCGTGACT TCAGCCGATG TTATTGCAGG AAGTAATACC
TTTGAACAAG CTCTTGTTTG GAAAAAGTAC CTAGAAAGAT CCTTACAACA AGCTCAATTG
CAGAGAACAT CTGAGTATTT ACGTCAATTT AGCTTATTAA GTATCGCAGC GATTTTAGGA
GCGATTCTCG GCCATGGAGG CTTGATTTTA CTGCGAATTT GGGGTGAACG AAACTGGCTT
CCCAGTTGGA GTCATCCCAG TTCCCCTTTG TATACCTGGC AAGGAATTGT CAGACCTTTA
TGGCGCATTT TTATCCTCGG AACTCCCCTG ATTCTTTGGT TGACAGCAAT TGGCTATATT
GGCTATCTGT TACCCCAAGC CAGAAGCGCA CTTTACCAAA TACTTATGTT TTTAGGACAA
CCTATTTTTG TCCTCGGTAA AAATAGCTAT TCGGCTACCC AATTACTCTT ACTTTTGTCC
TTAACGCTTG GACTATGGTT TTTAGTTAAA GGGTTGGTTC GTTTTTTAAA ATCCTATCTT
TTAGAACGTT TAGGAACTAG CCAAAGTGTT CAAGATGTTG TCGGGATTTT AACCCAATAT
ATCCTGCTGT TTTTAGGGTT AATTATTTTG CTACAACTCT GGGGACTGGA TATCGGTGCG
TTAGCTATTT TAGCGAGTGT TTTAGGCGTG GGTATTGGGT TTGGATTACA GAATATTGCT
AATAATTTTA TTAGTGGTTT AATTATTACT TTAGAGCGTC CCATTCAAGT AGGGGATTTT
ATTAAGTTAG GGGAATTAGT GGGAACGGTT AAAAATATTG GTGCGAGAAG TACCCAGATT
AAAACTTGGG ATGGCATCTC GATTATTGTT CCTAATTCGC GTTTTTTGGA AAGTGAAGTC
ATTAATTGGT CCTATGGTGA TAAAACGTCA GCCATTCGTA TTCCTATCAG TGTTGCTTAT
GGTTCTGATC TTAAACGAGT TAAGTTGGCT TTATTGCAAA CAGCTAAGGA ACATCCAGAA
ATTTTAGTGG TTCCCCGTCC TACGGTATTA TTTCAACAGT TTGGAGACAG TGCGTTAAAT
TTTGAATTAA GGGTTTGGCT CAAAGAACCT CGTAATCAAT TTCGGATTAA AAGTGAACTC
AATTATGCTA TTGACAAAAA CTTCCGTGAT TATGGTATTG AAATTCCTTT TCCTCAACGG
GATCTAAATT TGCGATCGCC TCACTTAAAA CCCTTGATTG AAAACATCTT AACATCGACA
GAAATGATTG ATAAACAGCC TTTAGAAATA CCAGATTTTG AGGAAGAACC TGAGTTAGAA
TCTTTAGAAG ATCTTTTAAC AGATAGGGAT CTTGAACGGT TGGTTCATGA AATGCGATCG
CCTCAAGGAT TGGATATTCA AAATCGTCGT TATCGTCTTC ATCTTTATCC TAATTGTTTT
ATTGGTTCTG AAGCAGTTAA TTGGTTAGTA CAACGTTATA AGTACACTAG GGAAGAAGCC
GTTGAAGTAG GTCAGATCTT AATGGAAAAA GGCATTATTT GTCATGTTTT AGATCAGCAT
CCTTTTCAAG ATAGTTATTT ATTTTATCGA TTTTTTCAAG ATGATAAATA A
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| Protein sequence | MYCLSWFSEG SKLIFLGLFA LILAISPISI LAQNPILNST EKAPIVVDGR VLFEVGSISN
FSAQQRASII NDILAEEVRS PDPVDVVIFD ENQRTVIRNQ ATKRHLLTVT SADVIAGSNT
FEQALVWKKY LERSLQQAQL QRTSEYLRQF SLLSIAAILG AILGHGGLIL LRIWGERNWL
PSWSHPSSPL YTWQGIVRPL WRIFILGTPL ILWLTAIGYI GYLLPQARSA LYQILMFLGQ
PIFVLGKNSY SATQLLLLLS LTLGLWFLVK GLVRFLKSYL LERLGTSQSV QDVVGILTQY
ILLFLGLIIL LQLWGLDIGA LAILASVLGV GIGFGLQNIA NNFISGLIIT LERPIQVGDF
IKLGELVGTV KNIGARSTQI KTWDGISIIV PNSRFLESEV INWSYGDKTS AIRIPISVAY
GSDLKRVKLA LLQTAKEHPE ILVVPRPTVL FQQFGDSALN FELRVWLKEP RNQFRIKSEL
NYAIDKNFRD YGIEIPFPQR DLNLRSPHLK PLIENILTST EMIDKQPLEI PDFEEEPELE
SLEDLLTDRD LERLVHEMRS PQGLDIQNRR YRLHLYPNCF IGSEAVNWLV QRYKYTREEA
VEVGQILMEK GIICHVLDQH PFQDSYLFYR FFQDDK
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