| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1315 |
|---|
| Symbol | |
|---|
| ID | 8390627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 1335087 |
|---|
| End bp | 1337990 |
|---|
| Gene Length | 2904 bp |
|---|
| Protein Length | 967 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644979323 |
|---|
| Product | DSH domain protein |
|---|
| Protein accession | YP_003137073 |
|---|
| Protein GI | 257059185 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4581] Superfamily II RNA helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATCAAC CCTTAGCCCA GTCTCAATTA AATTTAGCTA CTCTGTTTCC CTTTGAACTC
GATGGATTCC AAAAAGACGC GATCGCAGCC CTAGCCAGAG GAAAATCCGT AGTCATCTGT
GCCCCCACGG GGTCAGGAAA GACCGTCATT GGAGAATATG CCATTTATCA TGCCTTAGAA
CAGGGTAAGC GTGTCTTCTA TACCACTCCC CTCAAAGCCC TTTCTAATCA AAAATTCCGC
GACTTTCAGG ATAAATTTAG TCAAACAGAA GATAACAGCC TAGTCGGGTT AATCACAGGG
GACACGGTAA TTAATGCCAA CGCTGCCATT GTGATTATGA CCACGGAAAT CTTCCGAAAT
ATGCTCTACG AAACCCCCAT TGGTCAAGTG GGAACCTCCC TAGAAAACGT AGCCACGGTT
ATCTTAGATG AATGTCATTA TATCAGCGAT CGCGGTCGGG GAACCGTTTG GGAAGAGTCG
ATTATTTACT GTCCCCCCAA TATTCAATTA GTCGCCCTTT CTGCCACCAT CGGCAACCCC
GAACAACTCA CCGACTGGAT TAACCAAGTT CGCTTAACTG CCCCTGGAGT TGACCCAAAA
TCCGATGCTG TGAGTCTTTG TGAGTTAATT AATTCCGATT TTCGCCCCGT CCCGCTTCGT
TTCTTTTTTA GTACCAAAAA AGGACTTGCC CCCCTACTCA ATCCCAAACA AACAGCCCTT
AACCCTCGGC TTAAATTTAA AGGAAATCCT AACAAAAAAC GCCGACTCAA ACGGGAAGAC
TGTCCGAGTT TATTAACGGT CATTAAACAA TTAGAAAAAC AAGATTTATT GCCCGCTATT
TATGTGATTT TTAGCCGTCG CGGCTGCGAT CAATCAGTAC AACGACTTGA AGGGATCACC
CTAGTCAACC CAGAAGAAGC CCATGCCCTA CAATACAATT TATTAACCTT TTTCTTAGCG
GAAAATCCCC GGTTACAAGA AAGTCTGCTG GAGGCTGTAA AAACCGAAAA TCCTCCCTTA
TATCAACCCC TTTTAGACTT TTTATCCAGT CCTATCCCTG ATGCTGATTT ATTTGATTAT
TTAGCCAGAG ATCAAGAAAC AAAACTTCAT TTATTTCAAT TATTAGCCAC CACTTCCCAA
TTAGTCAGAA GTGATCAATT AGAACCTCTC ACCAGAGGCA TTGCCGTCCA CCATGCAGGG
ATTCTTCCCG TTTGGAAAGA ATTGGTCGAA CAACTCTTTG AAGCCGGATT AGTCAAAGTC
GTCTTTGCCA CCGCTACCCT ATCGGCCGGC ATTAATATGC CAGCGCGGAC GACGGTTATT
TCTGCCTTGT CTAAACGTAC CGATACCGGA CACGGGATGT TAACGCCCTC GGAGTTCCTA
CAAATCGCTG GACGCGCTGG AAGACGAGGG ATGGATGAAG TGGGTTATGT GGTGACAGTT
CAAACCCCCT TTGAAGGAGC CCAAGAAGCT GCTTTCTTAG CCACAGCCGG GTCAGAACCC
TTAAAAAGCT GTTTTACCCC TTCCTACGGG ATGGTGTTGA ATTTATTACA AAAACATACT
TTAAATGAGG CAAAACACTT ATTAGAGCGC AGTTTTGCCG AATATCTGGC AAAACTGAAG
ATCGAACCTG AACAACAAGC GATCGCAGCC TTAACCACGG AACTGACCCA ACTCGATATG
GCTTTAGCAG GACTCTCCGA AAGCGAACTG TTTGGCTATG AGAAACTAAA AGCCCGTCTT
AAGGAGGAAC AGCGATTGCT GAAACTGCTT GAAGAACAGG CAGAAGAAAC GAGAAAACAG
CAAATCTTCC CCCTATTAGC CAAGCTCAAC ACGGGAGATC TTTTGTATTT AAAGGGAAAA
CACCTAAAAG TCGCTACCCC TCAATTAGCG GTTTTAGTGG GGATGGTTCC GGGTTCGGGT
CAGGCTCCTG ATTTTCTGTG TTTAGGAGAA GATAATCGGT GGTATTTGGT CAAAAGAGCC
GATATCGTTG AAATAAATTC GGCTTCGTTG CCGCGTGAGA GTCTTCAGTC CTTAAATTTG
CCCGATCTCG AAGCGTGTCG TTTGGGTAAA GGTCCAAAAG GCGATGAAAC GTCAAGGCAA
GTTTGTCAGC AAATGGGCGA TCGCGCTGTT TCTCTAAAAA TTGCCCCTGA AGTCATGGCA
CAACAGCAGC GTTTAGACGA AATTCAACGA ACCCTAGAGC AGCATCCCCT AGAAAACCGC
AAAAATCCAG CCCGATTATT GAAATTACAC CATCAACGGC TGAGATTGCG CGAACAACTC
CATATTAGTC AGGTTCGGTT TCAAAAGCTT CAGTCAAGTC AATCCTATTA TTGGGAAGAA
TTTCTCAATT TAATCGAAAT TTTACGGGAA TTTGAAGCTT TAGAGGGCTA TCATCCTACT
CCCCTTGGCC AAGCTTGTGC AACGATTCGC GCCGAAAATG AACTCTGGTT AGGATTAGTA
ATGATGTCGG GTGCTTTGGA ACGGTTAGAG TCTCCCCAAC TCGCGGCCGC GGTGAGTGCC
TTAATTACCG AAAGTCTGCG GCCTGATACT TGGACAAATT ATCTCCCTTC CCCAGAAATT
ATCGCGTTAT TTACGGAAAG TCATCCCCAA GGAGTGAGTT TACAAGAAAT TCGCCGTCTT
CTCTATCAAA CTCAATCTCG CTATCATATC ACCATTCCCG TTTGGTTAGA ATTGGATTTG
ATTGGTATGA TCGAGCAATG GGCTTTAGGG GCAGATTGGC AGGAATTATG CGAGAATACC
AGTCTCGATG AAGGAGATGT CGTGCGGTTG TTAAGAAGAA CAATTGATCT CCTCTGGCAA
ATTCCCCAAA TACCCGGAGT TTCTGATTAT TTAAAAGACA CTGCCAAAGA GGCAGTGACT
CGGTTAAAAC GGTTTCCGCT TTAA
|
|---|
| Protein sequence | MNQPLAQSQL NLATLFPFEL DGFQKDAIAA LARGKSVVIC APTGSGKTVI GEYAIYHALE
QGKRVFYTTP LKALSNQKFR DFQDKFSQTE DNSLVGLITG DTVINANAAI VIMTTEIFRN
MLYETPIGQV GTSLENVATV ILDECHYISD RGRGTVWEES IIYCPPNIQL VALSATIGNP
EQLTDWINQV RLTAPGVDPK SDAVSLCELI NSDFRPVPLR FFFSTKKGLA PLLNPKQTAL
NPRLKFKGNP NKKRRLKRED CPSLLTVIKQ LEKQDLLPAI YVIFSRRGCD QSVQRLEGIT
LVNPEEAHAL QYNLLTFFLA ENPRLQESLL EAVKTENPPL YQPLLDFLSS PIPDADLFDY
LARDQETKLH LFQLLATTSQ LVRSDQLEPL TRGIAVHHAG ILPVWKELVE QLFEAGLVKV
VFATATLSAG INMPARTTVI SALSKRTDTG HGMLTPSEFL QIAGRAGRRG MDEVGYVVTV
QTPFEGAQEA AFLATAGSEP LKSCFTPSYG MVLNLLQKHT LNEAKHLLER SFAEYLAKLK
IEPEQQAIAA LTTELTQLDM ALAGLSESEL FGYEKLKARL KEEQRLLKLL EEQAEETRKQ
QIFPLLAKLN TGDLLYLKGK HLKVATPQLA VLVGMVPGSG QAPDFLCLGE DNRWYLVKRA
DIVEINSASL PRESLQSLNL PDLEACRLGK GPKGDETSRQ VCQQMGDRAV SLKIAPEVMA
QQQRLDEIQR TLEQHPLENR KNPARLLKLH HQRLRLREQL HISQVRFQKL QSSQSYYWEE
FLNLIEILRE FEALEGYHPT PLGQACATIR AENELWLGLV MMSGALERLE SPQLAAAVSA
LITESLRPDT WTNYLPSPEI IALFTESHPQ GVSLQEIRRL LYQTQSRYHI TIPVWLELDL
IGMIEQWALG ADWQELCENT SLDEGDVVRL LRRTIDLLWQ IPQIPGVSDY LKDTAKEAVT
RLKRFPL
|
|---|
| |