Gene Cyan8802_1302 details

Gene Information

• Locus tag: Cyan8802_1302
• ID: 8390614
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8802
• Kingdom: Bacteria
• Replicon accession: NC_013161
• Strand: -
• Start bp: 1318473
• End bp: 1321745
• Gene Length: 3273 bp
• Protein Length: 1090 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 644979310
• Product: multi-sensor hybrid histidine kinase
• Protein accession: YP_003137060
• Protein GI: 257059172
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0842919
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCAGAAC AAATTATTAA GCAACTTCAA CAAGAAATCG CTACCTTAAA AGCGGTACAA 
CAAGCGACCC TAAAAATCCA ACAAGAATTA CAAGAAAGTC AAGAACGTTG GCAGTTAATT 
ATCCAAGCAA CTAATGAAGG AATTTGGGAT TGGAATCTCA GGACTAATGA GCTTTTCATT 
TCTCCGCGTT GGAAAGAAAT GTTAGGCTAT CAAGACCAAG AATTACCCAA TCGTTTTGAT 
ACCTGGAAAC AGCTATTACA TCCCCAAGAT GTAGAACGAG TCATGGAAGC TGTACAAAAC 
CATCTAGAAG GTCAAACAAA CCATTATCAA ATTGAATTTC GACTGAGGTG TCAAGACGGT 
AATTATAAAT GGATTTTATC CAAGGGAAAA GCCCTTTGGA ATAGTGCAGG AAAAGCGATC 
CGTATGGTCG GTTCCCACAG TGATATTAGC GATCGCAAAG AAGAACAAAT CCTACTACGT 
TCCCTAATTG ATTCTATTCC TGACCTCATC TTTTGTAAAG ATGCCCAAGG GGTTTACAAG 
ATTTGTAATA ACGCCTTTGA AGCCTTTGTC GGAAAACCTA GTCAAGAAAT TGTTGGAAAA 
ACTGACTTTG ATCTTTTCCC CCCAGAAGAA GCCCTATTTT TTCGTGAAAA TGATCGCATT 
ATGAGGGAAA AAAAACGCCC CCATCGTAAC GAAGAATGGA TCACTTATCC TGATGGGAGT 
CGCCGTCTTT TAGATACCCT GAAAACCCCC TTTTGTTGCT CCGAAGGGAA GTTAATGGGA 
GTGATTGGTA TTAGTCGAGA TATTACCGAT CGCAAACAAA AAGAAAACAC CGTCAAAAAA 
CAAGCCAAAC GAGATAGTTT ACTCAGTAGT ATTGCTAGGC AATTAATCGA TCAAGACTTT 
AATACTGCCG TTAACTTTAC CCTAGAAGCC TTGGGTCACT TTACCGATGG CGATCGCGGC 
TACATTATCC GCTATTCCCC TCAGCAACGC CTCTGGAATA TGACCCATGA ATGGTGTAAT 
TATCAGGTTC CCTCAACCCT ACAACAGTCA CAAAATATCC CCGTCGAATA CCTACCCTGG 
TTCTCTCGCC AACTCCTCAA CGGTCAACCT ATTTGCGTCA ACTCCCTCGA TGATCTTCCC 
CCCCAAGCGA TCGCCGAACG AGTCGTCTTT AAAAATAGTC TCAACCCCAC CCTAGTCGTC 
GTTCCCATGG TAACAGCCGG TCAAACCGTC GGTTATTTAG GGTTTGATGC CAACTCTAGC 
AAAATTTGGA CCCAAGAAGA GGTTAACCTC CTAAAATTAG TGGGAGAATT TATTGCGATC 
GCCCAAGCGA GATCCCAAGC CGAAGACGAT CGCAAAGAGT CAGAAGCTAG ATTTGCAGGT 
ATTTTAGATA ACGCCAATGA AGCGATTATT TCCATTGATG AACAGCAACA GATTACCCTA 
TTTAACCATG CTGCCGAGAA AACCTTTGGC TATCAGGCCG TCAACGTTTT AGGACAACCC 
TTTAACCAAC TCATTCCCCC ACGCTTCCAA GACAGCCACT ATCAATACGT TGAAGACTTT 
AGTACCTGTT TAGAAACATC CCGACAAATG GTCGGCCGCC GTCCTGTTTT TGGTCGCCGT 
CAAGATGGTA GCGAATTTTT AGCCGAAGTC TCCATTTCTA AAATTCAACT CAAGGGACGA 
AAACTGTTTA CCGCCATTGT CAGGGACATT ACCGAACGTC AACAAGCCGA AGAAGCCCTC 
AAACAAGCTA AAGAAGCAGC AGATGCTGCC AACCGCGCTA AAAGCGAATT TCTCGCCAGC 
ATGAGTCATG AATTGCGGAC TCCCTTGAAT GCTATTTTAG GGTTTACCCA AGTCATGCGA 
CGCGATCGCA CCCTTAACCC AGAACACCAG CAAAATCTCT CTATTATTTC CCGTAGTGGG 
GAACATCTTC TCGAATTAAT CAACGACATC CTAGAGATGT CCAAAATTGA AGCCGGTCGC 
ACCACGTTTC ATAGCAATAG CTTCGATCTC TATCGGTTGC TGGATAATTT AGAAGCCATG 
CTGCATCTGA AAGCCCAAGA AAAAGGACTA CAACTGATCT TTGAACGCAC TCCAGAGGTT 
CCTCAGTACC TAGAAACCGA TGAAGGAAAA TTAAGGCAAG TTTTGATTAA TTTATTGGGA 
AATGCCATCA AATTCACCGA AGAAGGAGGA GTCACCTTAC GAGTGAAGTC AGAAGTCAGA 
AGTCGTAAAG GCGGGTTTCG TGAGTCAGCG ACGTTAAGAA CCATCGATCT TGAAAAACCC 
GCCCTAACAC CAATAATCGC CGACTCAGAA CAGATAGTGA TTACCTTTGA GGTAGAAGAT 
AGTGGCCCCG GAATTGCCCC GGAAGAAGTC GATCAACTCT TCGCAGCCTT TGGACAAACA 
GAAACCGGTC GTCAGGCCCA AGAAGGAACC GGTTTAGGCT TGCCCATTAG TCGCAAATTT 
GTCCAATTAA TGGGGGGAAA TATTAGTGTT AGTAGTATTC TTGGCCAAGG GAGTTTATTC 
GCTTTTAGCA TTAAAGCCAA GTTAACCAAT GCCAGTGCCA TTAAAACTCC AAAACCCATT 
AGAAAAGTCG TTGGTTTAGC CCCTGGCCAA CCACAATACC GTATTCTGTC CGTAGATGAC 
CGCTTAGAAA GTCGTTTACT GTTGGTTAAA TTACTCTCCT CCATGGGGTT TGAAGTCCGT 
CAAGCCAGTA ACGGGAAAGA AGCCTTGGAG ATCTGGGAAA CGTGGGAACC CCATTTAATT 
TGGATGGACA TGAGAATGCC AATTATCGAC GGTTATCAAG CCACTCAACG CATCAAAGCT 
ACTACTAAAG GTCAGGGGAC GGTAGTTATT GCCTTAACCG CCAGTGCCTT TGAAGAGGAA 
CGCAATATGG TATTATCGGC CGGATGTGAT GATTTTATGC GCAAACCCTT CCGAGAAGAG 
GTTCTTTGGG AAAAAATCGC CCAACATCTA GGAGTCCGCT ATATTTATGA GTCTTTGGAA 
CTAGAACAGG CACAAGGGAG GGAGATAGAA GAAAACCCAA CCGATAACCC CGATTATCTC 
TTAAAATTGT TATCTCAGAT GCCCGGTGAA TGGGTGAGTC AACTCGATCA AGCTGCCGTA 
GAATGCAGCG ATGATGGCAT ACTCGAATTA GTTAGCAAAA TTCCCTCAGA AAGTCAACCT 
TTAGCCATGA CTCTTAAGGG TTGGGCAGAT AATTTTTTCT TTGATCAAGT GATTGAATTA 
ACCCAAAAAT GTCTCAGCAA ACAGGCAAAA TAA 

 

Protein sequence

MSEQIIKQLQ QEIATLKAVQ QATLKIQQEL QESQERWQLI IQATNEGIWD WNLRTNELFI 
SPRWKEMLGY QDQELPNRFD TWKQLLHPQD VERVMEAVQN HLEGQTNHYQ IEFRLRCQDG 
NYKWILSKGK ALWNSAGKAI RMVGSHSDIS DRKEEQILLR SLIDSIPDLI FCKDAQGVYK 
ICNNAFEAFV GKPSQEIVGK TDFDLFPPEE ALFFRENDRI MREKKRPHRN EEWITYPDGS 
RRLLDTLKTP FCCSEGKLMG VIGISRDITD RKQKENTVKK QAKRDSLLSS IARQLIDQDF 
NTAVNFTLEA LGHFTDGDRG YIIRYSPQQR LWNMTHEWCN YQVPSTLQQS QNIPVEYLPW 
FSRQLLNGQP ICVNSLDDLP PQAIAERVVF KNSLNPTLVV VPMVTAGQTV GYLGFDANSS 
KIWTQEEVNL LKLVGEFIAI AQARSQAEDD RKESEARFAG ILDNANEAII SIDEQQQITL 
FNHAAEKTFG YQAVNVLGQP FNQLIPPRFQ DSHYQYVEDF STCLETSRQM VGRRPVFGRR 
QDGSEFLAEV SISKIQLKGR KLFTAIVRDI TERQQAEEAL KQAKEAADAA NRAKSEFLAS 
MSHELRTPLN AILGFTQVMR RDRTLNPEHQ QNLSIISRSG EHLLELINDI LEMSKIEAGR 
TTFHSNSFDL YRLLDNLEAM LHLKAQEKGL QLIFERTPEV PQYLETDEGK LRQVLINLLG 
NAIKFTEEGG VTLRVKSEVR SRKGGFRESA TLRTIDLEKP ALTPIIADSE QIVITFEVED 
SGPGIAPEEV DQLFAAFGQT ETGRQAQEGT GLGLPISRKF VQLMGGNISV SSILGQGSLF 
AFSIKAKLTN ASAIKTPKPI RKVVGLAPGQ PQYRILSVDD RLESRLLLVK LLSSMGFEVR 
QASNGKEALE IWETWEPHLI WMDMRMPIID GYQATQRIKA TTKGQGTVVI ALTASAFEEE 
RNMVLSAGCD DFMRKPFREE VLWEKIAQHL GVRYIYESLE LEQAQGREIE ENPTDNPDYL 
LKLLSQMPGE WVSQLDQAAV ECSDDGILEL VSKIPSESQP LAMTLKGWAD NFFFDQVIEL 
TQKCLSKQAK