| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1265 |
|---|
| Symbol | |
|---|
| ID | 8390577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 1287041 |
|---|
| End bp | 1288516 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644979273 |
|---|
| Product | NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 |
|---|
| Protein accession | YP_003137023 |
|---|
| Protein GI | 257059135 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00813231 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00210793 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCAAA CTAACCGTGC AAAATGGGAT TTAACCAGGT TCTGGAACAC CTTAAACTAC
TTTGAAATTG TTCCAGGGAT CAATATTGTA CAACGATTAC TCAACAAAGG CGATCGCCCC
TCAGTTAATT TATACCAAAA TAGTACCATG AACCGAATTT TAGTCGTCGG GGCTACCGGA
GGGGTAGGAA AACGAGTGGT TCGTCTCCTG CAAGCAAACG GCTACCCTGT TCGAGTCCTC
GTCAGAGACA GTCAAAAAGC CCAAGAATTA CTCCCACCAG GGGTAGAAAT CATCGAAGGA
GACATTACTC GACCCGAAAC CCTCACCCCT AAATTAATCG AAAATATTGC TGCGGTGATT
TGCTGTACGG GAACTCGCGT TCAACCCGTC GAAGGAGATA CCCCCAACCG CGACAAATAC
TATCAAGGGG TCAAATTTTA TCTACCCCAA GTCGTCGATA GTCCCGAACA AGTGGAGTAT
CTAGGAATGA AAAACCTCAC CAAACTGGTG AAACAGTACC TTAGACCCGG GGAAAAAGTG
ATTTTTGACT TTACCCACCC CACGGAAGCC ATAAAGGCTG CTTGGGGGGC TGTAGATGAC
GTGGTGATGG GGGGAATTAG TGAAAGTTCA CTCCGTTTGG TCAACCAAAA AGCCATTTTT
TCGGGCAACG TTTCTACTGC CAATAATGGT GGGTTTGCCT CCGTTCGGAC GCGCAATTTT
GAGCCTCCCT TAGATTTATC GGGCTATGAA GGCATTCAAT TACAAGTCAA CGGTGATGGC
AAGCGATATA AGTTTATTAT TCGCTGCGAG GGCAAATGGG ACGGTCTGGG TTACTGCTAT
TCCTTCAATA CCTTCTCTAA CCGTCCTAGC AGCATCAGTA TTCCGTTTAA TGAGTTAATT
CCCGTGTTTC GGGCAAAAAC CGTCCCCGAT GCCGGGGCTT TTGATGCCAG TCGGGTCTAT
TCCATGCAGT TGATGCAAAC CAAGTTTGAG TACAATGGCG AATTAAACCC TCGATTTTCC
CCCGGTCTGT TTGGCTTAGA AATTGAATCG ATTAAAGCCT ACGGGGGTCA GCCTAAGACA
CCCCATTTTA TCCTAATTAG TTCGGCTGGT GTAACCCGCC CTGGGCGACC TGGATTGAAT
TTAGACGAAG AACCCCCGGC GGTGAGACTC AATGACCAAC TGGGGGGAAT TTTGACCTGG
AAATGGCGAG GAGAAGAGGT GGTGCGTCAA AGCGGACTTA ATTACACCAT TATTCGTCCC
TGTGCCCTCA CAGAAAAGCC TGGGGATAAA GGTCTGGTCT TTGACCAAGG GGATAATATT
AAAGGACAGG TCAGTCGGGA TGCGATCGCG GCTTTGTGCC TGGATATCTT AAAAAATCCC
CAAGCTGGTC AAAAAACCTT TGAGGTTCGC GAGGAAGACA CCCCTTTTAA TCCTCAAGAC
TGGGGTCAAG CGTTGGCTTC TCTAAGTTTG GATTAA
|
|---|
| Protein sequence | MSQTNRAKWD LTRFWNTLNY FEIVPGINIV QRLLNKGDRP SVNLYQNSTM NRILVVGATG
GVGKRVVRLL QANGYPVRVL VRDSQKAQEL LPPGVEIIEG DITRPETLTP KLIENIAAVI
CCTGTRVQPV EGDTPNRDKY YQGVKFYLPQ VVDSPEQVEY LGMKNLTKLV KQYLRPGEKV
IFDFTHPTEA IKAAWGAVDD VVMGGISESS LRLVNQKAIF SGNVSTANNG GFASVRTRNF
EPPLDLSGYE GIQLQVNGDG KRYKFIIRCE GKWDGLGYCY SFNTFSNRPS SISIPFNELI
PVFRAKTVPD AGAFDASRVY SMQLMQTKFE YNGELNPRFS PGLFGLEIES IKAYGGQPKT
PHFILISSAG VTRPGRPGLN LDEEPPAVRL NDQLGGILTW KWRGEEVVRQ SGLNYTIIRP
CALTEKPGDK GLVFDQGDNI KGQVSRDAIA ALCLDILKNP QAGQKTFEVR EEDTPFNPQD
WGQALASLSL D
|
|---|
| |