| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1170 |
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| Symbol | |
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| ID | 8390481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 1193114 |
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| End bp | 1196695 |
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| Gene Length | 3582 bp |
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| Protein Length | 1193 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644979183 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003136934 |
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| Protein GI | 257059046 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAATT ATTGGAAATT AACCCTTTTT TTTGGTGTAG ATTTCCTATT TGGTACGATC
GCTGTTTGGA TTATTTTAAA CAGTTATGGC CTCTTCTGGG GAGTTCTGGC GGGAATCATT
AGCGGTAGTT GTACCTATCT TCTCTGGGGA CACCCCTATG CCTGGATTGT TTTTACGGCT
GAAACGGTTT TTGTCGCGCT TTTGCTGCGA CGTTATCCCA ATTTTGTCCT ACTCAATGGC
ATTTATTGGC TATTTATTGG AATGCCTCTG GTCGCCTTTT TTTATTATTT TGGTGTACAC
CTTCCTCCTC TAGCTACGGG GTTAATTGTT TTAAAACAAT CGGTTAATGG GATTTTTAAC
GCGGTTATTG CTAATTTAAT TATTACCTAT TTTCCCCTCG CTAGTCTGAT AGGTCGTCCA
AAAGCAACTC GCAAACTATC TTTTCAACAA ACACTCTTTA ATTTATTGGT TACATTTGTG
TTAATTCCGT CGTTAATTTT AACAGTTTTT CAGAGCAATC ACCTGATCAA TTCTCTGGAA
AATGAAATCA AAACGGAATT ACAGATGGTC GTTGCTCCTA TTACCCATAA TATCTATCTT
TGGTATCAGC CCTATCTGCG AGGACTGCAA TTGCTCCAAC AGGAAATTGT TAAAGTCGGC
ACTTTAGACG CTCCTCAATT GCAAACAGCC TTAAAATTGC TTAAACAGAA CTTTCCTAGT
TTTGGTCATA TTTACATTGC CAATGCCCAA GGAAAGGTCA TTCAGGCTTA TCCTGAAGTT
AATGAAGAGG GTCAAGCTTT AGTGGGAACA AATGTCTCTA GCATCCTTGC TCTACCACGA
ATGGCCAGGC TTCGTCAACC GGAAATGACT AATATTCACC GAGATCAGGC TTCTTCTGAT
TTTCACGTTG GGATTAAAGT GCCTATTTTA CAGGGGTCTC AACAGCAATT GAAGGGGGTT
GTTTACGGAT CTTTAGCCTT AACCCAACTC ACCCATTTAC TTGAACAAAA TATCCCTAAT
TTAGATCTCC AAACTATCTT AGTCGATCAG CAAAATCGAG TGATTGCCGA TAGCAAGAAC
CAGTTAAAAA CCCTAGAAAT TTTTGATTGG AAAGCCGGGG GTGAAATTCG TAATAGCAGT
CTTGGCACTT TACAATGGTT GCCCATTATC CCTGGAGGAA ATGCTGTAAC CCGTTGGCGC
AAATCTTTCT ATGTTAAAGA GGTTGAGCTT GGACAGGGAC TGTATTGGAA GTTAATTATT
CGCATTTCTA CGGCTCCTTA CTTTAGCACT TTAGAAAGCC TCTATGTCAA AAATTTATCG
GTCATGTTGG CTATTACTTT GTTGGGAGTA TTTATTTCAG GATTGATCAG CCGAAATATG
GCTTTTCCTA TCCTAAAATT AGCGAAAATA ACGACGGATT TACCCACGAA GATTGCTCAA
CAAGATCCCG AAGAAATTTT AGTCGAAACT AAGGTAGCAG AATTAGAGAC TTTATCCCAT
AATTTCCAAA CGATGACAGC AACGCTTAAA CACCAATTTT CAGAAATTCA AGAAACAAAA
AATACCTTAG AAAAACGGGT AGAAGAAAGA ACTGAGGAAT TATCACGACT TAATCAAAAT
CTAACGGAAG AAATTCTCCA ACGGCAAGAA ATTGAAGCTG ATTTAAGAGA AAGTGAAAGC
CGCTATCATT TAGCCGTATC AGGGACAAAT GATGGGATTT GGGATTGGGA TTTACGAACC
AATAAAGTAT ATTATTCTCC AGTTTGGATG AAGATTTTAG GCTATAAACC TGATGCTTTA
CCCCATTTAT TAACAACTTG GTCAGACAAT GTATATCCTG ATGATCTAGA CCGGACTCTT
AAGGATGTTC AAAATCATTT AGATGGCAAG ACAGAGGTTT ATGAAAATAG TCATCGTATT
AAACACCGTG ATGGTCACTA TATTTGGATT GAAGCTAAAG GAAAATGTCT CAGAAATCAA
GAAGGTCATC CCTTGCGGTT AGTGGGAACT ATTACCGATA TTACTCAGAA AAAAGAAGCG
CAAGAAGCAC TGAGAAAAGC CAAAGAATCA GCCGAAATTG CAAACCGAGC TAAAAGTGAA
TTTTTGGCAA ATATGAGTCA TGAAATTCGC ACACCGATGA ATGCTATTTT AGGGTTTTGT
GAGTTACTAC AAGGGATAAT TGATGACCCT CGTTCCCGTT CTTATCTTAA TTCTATTGCC
TCTAGTGGCA AAATTTTACT AGCTTTAATT AATGATATTC TAGATCTTTC TAAAATTGAT
TCAGGCAAGC TACAAATTAA CTATGAGCCG ATTCATTTAC GAGCCTTAAT TGAAGAAATT
TATCAAATTT TTGTAGAAGA TGCGCAGAAA AAAAAGGTAA CTTTATCACT TTTTATTGCC
GATGACATTC CGTCTACTAT TATTTTTGAT GAAGTTAGAC TCAGACAAAT TCTTTTTAAT
GTTCTGGGAA ATGCTTTAAA ATTTACTCAC GAAGGAGCAG TAAAAATTGC TGTCAAAGCA
ACTAAAAAAC TCCCAGAGAA TCGAGAAAAA ATTGATCATG TATATCACAA TCGTTTAGTC
AATCAACAGT CAAAAGCAGA TTGTTATTGT TTAACCATTT CAGTCGAAGA TACAGGGATT
GGTATTGCTC CCGAACAACA GGATTATATC TTTGATGCCT TTACTCAAAG CGAAGGGCAA
AGCACCCGTA AATATGGAGG AACTGGACTA GGATTAACCA TTACCCGAAG ACTCACACAA
ATGTTAGGAG GAACTATTCA CTTACAAAGT CAATTAGGCA AAGGAAGCAC TTTTACTTTC
TATTTTCCTA ATGTTTCTTT TGCTGAAACC CACGATATTC AAAGAGAACA AAAAGAAATA
AATATTGATT TTAATCAATT CGATTCAGCA ACAATTTTAG TGGTTGATGA TGTGATCTCA
AATCGGGAGT TAATAGAAGG GTATTTTGCT AATACTCATC ATCGAATTTT ACAAGCAAAA
GATGGAATAG AAGCGATTAA TCAAGCTCAG TTCTATCATC CTGATGTTAT TTTGATGGAT
TTACGAATGC CTCGTATGGA TGGGCTTGAG TCCAGTAAAA TTCTTAAAGA AGATCCATTG
ACTCAAGATA TTCCTATTGT TATTATTACC GCTTCTTCTA AAAAAGATGA AGAACAATTG
CTCAAAACTT TTTGTGTGAC TTGTCTCTAC AAACCGATCT CTAGAAGTGA ATTATTCGAG
ACGTTAAAGA ATATTTTGCC CTATAATGGG TCTAAACAGA CAATTTCTAC AATAGAAACC
CCTGTAGAGC AGGGACTTGA TGAATATGAG CCTGCATCCC CTGAACTCTT AGAAAAGCTG
CTTCTGGAAG AAGAGTTGGT GTGGACTTAT TTACATCAGA CAATGATCAT GAAAGATTTG
CGTCAATTTG CTCAACATTT GAGAGAATGG GGAGAGGAAT ATCAGTGTAA TATATTGCTC
GATTATGTTA CCCGTTTAGA AACTCAGATT CAAGACTTTG ATGGGGAAAA ACTATCCAAA
ACTGTAGCAG CTTTCCCTGA ATTGCGGCGT TCGCTATCAT GA
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| Protein sequence | MGNYWKLTLF FGVDFLFGTI AVWIILNSYG LFWGVLAGII SGSCTYLLWG HPYAWIVFTA
ETVFVALLLR RYPNFVLLNG IYWLFIGMPL VAFFYYFGVH LPPLATGLIV LKQSVNGIFN
AVIANLIITY FPLASLIGRP KATRKLSFQQ TLFNLLVTFV LIPSLILTVF QSNHLINSLE
NEIKTELQMV VAPITHNIYL WYQPYLRGLQ LLQQEIVKVG TLDAPQLQTA LKLLKQNFPS
FGHIYIANAQ GKVIQAYPEV NEEGQALVGT NVSSILALPR MARLRQPEMT NIHRDQASSD
FHVGIKVPIL QGSQQQLKGV VYGSLALTQL THLLEQNIPN LDLQTILVDQ QNRVIADSKN
QLKTLEIFDW KAGGEIRNSS LGTLQWLPII PGGNAVTRWR KSFYVKEVEL GQGLYWKLII
RISTAPYFST LESLYVKNLS VMLAITLLGV FISGLISRNM AFPILKLAKI TTDLPTKIAQ
QDPEEILVET KVAELETLSH NFQTMTATLK HQFSEIQETK NTLEKRVEER TEELSRLNQN
LTEEILQRQE IEADLRESES RYHLAVSGTN DGIWDWDLRT NKVYYSPVWM KILGYKPDAL
PHLLTTWSDN VYPDDLDRTL KDVQNHLDGK TEVYENSHRI KHRDGHYIWI EAKGKCLRNQ
EGHPLRLVGT ITDITQKKEA QEALRKAKES AEIANRAKSE FLANMSHEIR TPMNAILGFC
ELLQGIIDDP RSRSYLNSIA SSGKILLALI NDILDLSKID SGKLQINYEP IHLRALIEEI
YQIFVEDAQK KKVTLSLFIA DDIPSTIIFD EVRLRQILFN VLGNALKFTH EGAVKIAVKA
TKKLPENREK IDHVYHNRLV NQQSKADCYC LTISVEDTGI GIAPEQQDYI FDAFTQSEGQ
STRKYGGTGL GLTITRRLTQ MLGGTIHLQS QLGKGSTFTF YFPNVSFAET HDIQREQKEI
NIDFNQFDSA TILVVDDVIS NRELIEGYFA NTHHRILQAK DGIEAINQAQ FYHPDVILMD
LRMPRMDGLE SSKILKEDPL TQDIPIVIIT ASSKKDEEQL LKTFCVTCLY KPISRSELFE
TLKNILPYNG SKQTISTIET PVEQGLDEYE PASPELLEKL LLEEELVWTY LHQTMIMKDL
RQFAQHLREW GEEYQCNILL DYVTRLETQI QDFDGEKLSK TVAAFPELRR SLS
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