Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1093 |
Symbol | |
ID | 8390404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 1117575 |
End bp | 1119536 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644979109 |
Product | ribonuclease, Rne/Rng family |
Protein accession | YP_003136860 |
Protein GI | 257058972 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAGC AAATTATTAT CGCGGAGCAA CACCATATTG CTGCTGTTTT CTGGGAAGAT CAAATTCAAG AATTGGTAGT AGCCACAGGC AACCAACAAG TCGGAGACAT TTATTTAGGA TTAGTTGAAA ATGTCATCCC AGGCATTGAT GCAGCCTTTG TGAATATCGG AGATGCCGAA CGCAATGGGT TTATTCATGT CACCGATTTA GGCCCTGTGA GGTTAAAAAA GAGTGCAGGA GCTATTACGG AACTGCTGAC CCCCCAGCAA AAAGTCCTGG TTCAAGTGAT GAAAGAACCC ACGGGGAACA AGGGACCTCG ACTAACGGGC AATATTACCC TACCTGGACG CTATTTAGTC TTAATGCCCT ATGGTAAGGG GGTCAACCTC TCCAGACGCA TTAAAACCGA TGATGAACGC AGTCGCTTAC GCGCTCTGGC TATTTTGATT AAACCCGCCG GAATGGGACT TCTGGTGCGT ACGGAAGCCG AAGGCAAAGC CGAAGAAGCC ATCATGGAGG ATTTAGAGTT TCTTCAGCGA CAATGGGAAT CTATCCAAGT TCAAGCCACT TCTACCCGTC CTCCGTCCCT GTTAAACCGA GATGATGATT TTATTCAACG GGTCTTGCGG GATATGTACA GTGGAGATGT TAACCGTATT GTGGTGGACT CTCCGGCCGG GGTTAAGCGA GTTAAACAGC AATTAATGAC CTGGAGTGGT GGTCGTTCCC CAGAAGGAGT CCTCATTGAT CATCACCGCG AAACCCTACC TGTTTTAGAT TATTTCCGCG TTAATGCAGC TATTCGAGAG GCTCTTAAAC CTAGGGTGGA TTTGCCCTCT GGAGGGTACA TTATCATAGA ACCCACCGAA GCCCTAACGG TGATTGATGT GAACTCCGGG TCCTTTACCC GTTCAGCAAC GGCACGGGAA ACGGTGCTGT GGACTAATAG CGAAGCAGCG ACAGAAATTG CTCGTCAATT GCGTCTGCGA AATATTGGCG GGGTGATTAT TGTGGACTTC ATTGATATGG ACTCGCGACG CGATCAATTG AAGTTGCTAG AACATTTTAA TAAAACCTTA AGAGCCGATA AAGCCAGACC TCAAATTGCC CAACTTTCTG AACTGGGGTT GGTGGAACTG ACCCGTAAGC GTCAGGGTAA AAATATTTAT GAGTTATTTG GTCAACCTTG TCCCAATTGT GGCGGGTTAG GGCATCTGGT TCATCTGCCG GGTCAATCGG AATTAATTGC CTTAGAAACC GTGACGGTTG CGCCACCGAT TCCTGTGGCT AAACCCATTG AGAAACCCAC AGAAGTGAGT GAACCGTTTG GGGAATCGTT TTTTGAGGAG GACATGATTG ATATCCCTCG TCAATTGGAA TTACTTCACC ACCCCAGTTA TCAAGAGCAA GGCAACATTC CTAATACCCG TCGTCGTCGT CGTCGTCAAC CTCAACTCAA AGAGGAATCT ACCAGCAATC CCAAAGTGAT TCTGAGTACG CCGACTAAGG AAGTAGATTA TTCAACAGAT ACGGAAGTAG AACCTCGAAA AGAACGAACT CCAAGGCATT TGCGTCGAGA AGAAACTCCC ATCGAAAGGG TATCGGTGGA AATGACCCCC CTCGAACAAG ATGTCTATGC TTTAATGGGA ATTTCTCCGT TAGTCCGTCT TGATCAGGAA TTTAAAGAAC CGAAGTCTGT GGTAGTCTCT GTTAAGCTTC CTGAAGGTTC TGAGGATAAG ATTTATGCGC CTAAATTAGA GACACCAACG GGAGCATCTG AATCTTTCTC TGTGACAGTG GTTGAGCCCC CGAAAGAACT AGAATCAGAA CCAGAATTAG ACTCAGAACC CGACTTAGAA ACCGACCTCG AAAACGACAC AATGATCAAA TCACACGAGA CTGACTCACA ACGTCCAGTC ATTCGTCGTC GTCGTCGTCG TTCCTCGGCT AAGGAGAGTT GA
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Protein sequence | MPKQIIIAEQ HHIAAVFWED QIQELVVATG NQQVGDIYLG LVENVIPGID AAFVNIGDAE RNGFIHVTDL GPVRLKKSAG AITELLTPQQ KVLVQVMKEP TGNKGPRLTG NITLPGRYLV LMPYGKGVNL SRRIKTDDER SRLRALAILI KPAGMGLLVR TEAEGKAEEA IMEDLEFLQR QWESIQVQAT STRPPSLLNR DDDFIQRVLR DMYSGDVNRI VVDSPAGVKR VKQQLMTWSG GRSPEGVLID HHRETLPVLD YFRVNAAIRE ALKPRVDLPS GGYIIIEPTE ALTVIDVNSG SFTRSATARE TVLWTNSEAA TEIARQLRLR NIGGVIIVDF IDMDSRRDQL KLLEHFNKTL RADKARPQIA QLSELGLVEL TRKRQGKNIY ELFGQPCPNC GGLGHLVHLP GQSELIALET VTVAPPIPVA KPIEKPTEVS EPFGESFFEE DMIDIPRQLE LLHHPSYQEQ GNIPNTRRRR RRQPQLKEES TSNPKVILST PTKEVDYSTD TEVEPRKERT PRHLRREETP IERVSVEMTP LEQDVYALMG ISPLVRLDQE FKEPKSVVVS VKLPEGSEDK IYAPKLETPT GASESFSVTV VEPPKELESE PELDSEPDLE TDLENDTMIK SHETDSQRPV IRRRRRRSSA KES
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