| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1089 |
|---|
| Symbol | |
|---|
| ID | 8390399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 1112838 |
|---|
| End bp | 1113764 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644979104 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_003136856 |
|---|
| Protein GI | 257058968 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.527796 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCAC AAGTAGAACA GTCAATATTA GACGAACAAC CAAGCCAAAA TAGTTTACCA
ATGATCTTAG ATATTTGCTC AGGTATTGGA CTTTTTGGTG GAGTCGTTGG TTCTCTCTTT
AATAACGTTG CTTTAGCGAC TATTCCTGTT TCCATTGCTC TTGCTATGCA AATGGCTAAC
CGCAGACAAC TAGCAGTGGA AAATGCTCAA ATTCAACAAG CTACTCTTGT TCAATTAAAC
GAGCAAATTA ATCACAATCA AACGATACTA TCTCAACAGA TTAGTAAATT TCAACAGGAG
ATTGATTTGT ATATCAGTCA ACAAAACCAA GACCATAAAA AGCAAATTAA GGAGGTGTCA
GAAAAGCTAG AACAAAACCT TCATCAAAAC ACGATGGAAG TGAAAAAATC AATTGCTGAA
GCTGAGCAAG AACGGGAGCA AATAAGTCAA TTGACCTATG ATTTAAAGCA ACACCAACAA
CAGATTCAAA TCATTGTTAG TGAATTGCAA CAAATTGAGA ACTTCTCTGT TGTTATTGAT
GGCAATAGTC ATCAGGCTAA TACTTATTAT GAACGGGGAC TCAGTTATCA GAAATTGGGC
AATAAAACGG GAGCAATTCA AGATTATACA GAAGCGTTAC ATCTTGATTC TACCTATGCT
AAAGCCTATC ACCATCGAGG CATTCTTTTA GCAGAATTAG GCAACCGTAA ACAAGCAGTA
GAAGATTTAC GTCTGGCTGC TAAATACTAC TTTGAACAAG GTGATCTTAA GGGTTATCAA
CAAGCGCGAG ATTTAAGCAA GGAATTTTAT GAAATTCGTC ATTTTGCAGA AGATGAGATG
GTTTTGAACG CTTCACAAGA GTTTGAACAT CACGAACAAG ACAATCAGTC CATAGAAGTT
ATCTCTGTGG GTAATCTTTT CTCCTAA
|
|---|
| Protein sequence | MEPQVEQSIL DEQPSQNSLP MILDICSGIG LFGGVVGSLF NNVALATIPV SIALAMQMAN
RRQLAVENAQ IQQATLVQLN EQINHNQTIL SQQISKFQQE IDLYISQQNQ DHKKQIKEVS
EKLEQNLHQN TMEVKKSIAE AEQEREQISQ LTYDLKQHQQ QIQIIVSELQ QIENFSVVID
GNSHQANTYY ERGLSYQKLG NKTGAIQDYT EALHLDSTYA KAYHHRGILL AELGNRKQAV
EDLRLAAKYY FEQGDLKGYQ QARDLSKEFY EIRHFAEDEM VLNASQEFEH HEQDNQSIEV
ISVGNLFS
|
|---|
| |