Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1043 |
Symbol | |
ID | 8390352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 1067255 |
End bp | 1067818 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644979058 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_003136811 |
Protein GI | 257058923 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.363938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000478309 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAAAAC TCTCTGGATT GGTCAGTTCT AGCCTTAAAT CTTTACTCGC TTTTGGACTT GCTATCAGCA GTGTTGGTGT TATTTCCCCT GCAATGGCTG ATTCTACCAT GTCTCAAGGA TCTTCTTCTG AAACCATGAG TTCAGAGAAG GAAATGAATA TCGTTGATAC TGCGGCTTCT GCGGGATCAT TCAAAACCTT AGTCGCTGCG GTTGAAGCAG CCGGGTTAGT TGAAACCCTC AAAGGAGAAG GTCCTTTTAC CGTGTTTGCA CCTACTGACG AAGCGTTTGC AGCACTTCCG AAAGGAACGG TAGAAGAGTT ACTCAAACCC GAAAATAAAG ATAAATTAGT GGCCATTTTG ACTTATCATG TCGTTCCTGG CAACGTCATA TCCAAAGACC TCAAAGCAGG TGCCGTTAAA ACCGTTCAAG GTGGTGATGT TAAGATTGAA TTAGGCAATA CCGTCAAAAT TAATGACGCT ACTGTTGTTA AAGCCGATAT CAAAACCAGT AACGGCGTTA TCCACGTCAT CGATAAGGTG ATGCTTCCCC CTGAAGCAAA ATAA
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Protein sequence | MLKLSGLVSS SLKSLLAFGL AISSVGVISP AMADSTMSQG SSSETMSSEK EMNIVDTAAS AGSFKTLVAA VEAAGLVETL KGEGPFTVFA PTDEAFAALP KGTVEELLKP ENKDKLVAIL TYHVVPGNVI SKDLKAGAVK TVQGGDVKIE LGNTVKINDA TVVKADIKTS NGVIHVIDKV MLPPEAK
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