Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1033 |
Symbol | |
ID | 8390342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 1057158 |
End bp | 1058408 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644979048 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_003136801 |
Protein GI | 257058913 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.344987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000487812 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCGATTA AGCTGTTAAG CCAATTTTTA GTTATTTTAG TTGTTCTAGT CTCCTTATTC GTGAACAACC TAGTGTTGGC TAGTGAACAA TATAAAGACC CCATTGTCAT TGGAATGTCT GCCGCTTTCA CGGGAGCATC AAAAAATCTT GGCTTAGAAT TATATCATGG CTCAATGGCT TATATCAACA AGATTAATCA GTCGGGAGGC ATTAATGGTC ATCCCCTTGT AATTAAAGCT TATGATGATG GATATAATCC TTTACCCGCG ATTGAAAATA CGGTGAATCT GGTGGAAGAA GATGAAGTCA CTGTATTATT TGATTATGTA GGAGATCCCA CCGTTACTAA AATTTTACCA CTGTTAAAAA AATACGAAGC TAAAAATATC ATGCTATTTT TCCCCTTTAC AGGAGCCCAA TCCATGAGGC AAGTGCCTTA TAATCAATAT GTGGTTAATC TGAGGGCATC TTATCGGGAA GAAACCGCCG GATTAGTAGA TCATTTATTA GGGATTGGCC ACAAGCGTAT AGCTGTATTT TATCAAATTG ATGCCTATGG TCGCAGTGGT TGGGATGGCG TACGCAAGGC ATTAGAAAAG TATGGACTAG ATATTGTTGC TGAAACGACC TATCGTCGAG GAACTGAATA TAATAGTAGT TTTAACCCTC AAGTTAAGAT TTTACAAGAG GCCGATCCCG ATGCTATTAT TTCTATTGGT AACTATCAAG CTTGTGCTGG ATTTATTCGA GATGCAAGAG ATGCAGATTG GGATATTCCT ATTGCTAATG TTTCCTTGGT GGGGAGCGAA AGTTTATTAA AATTATTATT AGAAACAGGT CGTAAAACCC AGAGAAACTA TACTCAGAAT TTAATTAATT CCGAGATTCT TCCTAGTTAT GAGGATCTTT CCCTCCCTGC TGTTAAAGAA TATCGTAATG CCATCAATAG CTATCGTGGA AAATCACCGA TCACGAAAGA GAATTATACT GAGTCAGGTT ATAATTATGT GAGCTTTGAA GGGTTTCTAA ATGCTAAATT AATGGTAGAG ATTTTAAAGC GTTGGACAGA TTTTTCTGAT CAAGATCAGC TTCATGAAAT TGTCGATCAT CTCAACGATT TTGATCTCGG CATTGGGGTT TCACTACAGT TTAAACATCC TGAACATCAA GGACTACACC AAGTCTATTA TACTACCGTT TCTAATAATA AATTTGTCCC CCTTAAAGAT TGGAGAAAAT GGTCAAAATG A
|
Protein sequence | MAIKLLSQFL VILVVLVSLF VNNLVLASEQ YKDPIVIGMS AAFTGASKNL GLELYHGSMA YINKINQSGG INGHPLVIKA YDDGYNPLPA IENTVNLVEE DEVTVLFDYV GDPTVTKILP LLKKYEAKNI MLFFPFTGAQ SMRQVPYNQY VVNLRASYRE ETAGLVDHLL GIGHKRIAVF YQIDAYGRSG WDGVRKALEK YGLDIVAETT YRRGTEYNSS FNPQVKILQE ADPDAIISIG NYQACAGFIR DARDADWDIP IANVSLVGSE SLLKLLLETG RKTQRNYTQN LINSEILPSY EDLSLPAVKE YRNAINSYRG KSPITKENYT ESGYNYVSFE GFLNAKLMVE ILKRWTDFSD QDQLHEIVDH LNDFDLGIGV SLQFKHPEHQ GLHQVYYTTV SNNKFVPLKD WRKWSK
|
| |