| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1032 |
|---|
| Symbol | |
|---|
| ID | 8390341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 1056029 |
|---|
| End bp | 1056979 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644979047 |
|---|
| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
|---|
| Protein accession | YP_003136800 |
|---|
| Protein GI | 257058912 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000405209 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGCTA TGCAAACCTA TACTTTAATG GCTTCGGCTA AGATTAATCT TTATCTGGAA
ATCATTGGCG ATCGCCCTGA TGGCTACCAT GAATTGGTGA TGATCCTGCA AAGCATTGAC
TTGGGCGATC GCTTAGAACT CCGTCCCAAT GGGACCCAAA CCTTTCGCTT AAACTGTTCC
CATCCCCAAG TACCCACCGA TAATACCAAT TTAGCCTATC GAGCAGCGCA ATTGATGAAA
CAGGAGTTTA GTCAAGCGTT TGCTAACTAT GGGGGAGTAG ATATTACCTT AGATAAGCAT
ATTCCTGTGG CTGCAGGGTT AGCCGGGGGG TCAACCGATG CCGCCGCCGT GTTAGTCGGC
TTAGACTTAA TGTGGGAATT GGGTTTAACC TTGCCAGAAT TACAGGAATT AGGCGGAAAA
CTAGGCTCAG ATGTCCCCTT TTGTATCGCA GGAGGAACCG CGATCGCCAC AGGACGAGGA
GAAAAACTAG ACCCCATTGA AGATATAGAC CATCTTTGGG TAGTTTTAGG CAAATACCAG
AGCTTAGAAG TCTCTACTCC TTGGGCTTAT CAAACCTATC GACAAAAATT TGGAGACGCT
TATATTAGCG ATCGCCCTGC TGTAGAGTCC CGAACCTTCA AGGTTCATTC AGGACCTTTA
GTTAAGGCTA TCAGCCATAA AGATAACACG AAAATCGGTC AACTATTACA CAACGATTTA
GAAAAGGTAG TTTTGCCCGA ATATCCCCAA GTGAACCATC TTAGAGAGGT CATGCAACAA
GCCGGGGGAC TCGGAACCAT GATGTCAGGA TCAGGTCCAA CCGTGTTTAC TCTCTGTGAG
TCTCAAGAAG CAGCAGAAAC GATTAAAAAT CAAGCAAGAC TCGCTATTGA GGATGCAGAC
CTAAAATTTT GGGTGACAAA GCTATCTAGC AATGGAATTA AAGTACTTTA A
|
|---|
| Protein sequence | MCAMQTYTLM ASAKINLYLE IIGDRPDGYH ELVMILQSID LGDRLELRPN GTQTFRLNCS
HPQVPTDNTN LAYRAAQLMK QEFSQAFANY GGVDITLDKH IPVAAGLAGG STDAAAVLVG
LDLMWELGLT LPELQELGGK LGSDVPFCIA GGTAIATGRG EKLDPIEDID HLWVVLGKYQ
SLEVSTPWAY QTYRQKFGDA YISDRPAVES RTFKVHSGPL VKAISHKDNT KIGQLLHNDL
EKVVLPEYPQ VNHLREVMQQ AGGLGTMMSG SGPTVFTLCE SQEAAETIKN QARLAIEDAD
LKFWVTKLSS NGIKVL
|
|---|
| |