| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0823 |
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| Symbol | |
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| ID | 8390131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | + |
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| Start bp | 828425 |
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| End bp | 830878 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644978842 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003136596 |
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| Protein GI | 257058708 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCATT GGAGAATATT ACTGACTAAA AAATGGGCTA ATCTTTCCCT AAGGGCTAAA
ATAATTTTAG CTTTTTTTTC ATTAATGATT GTCTCTACGA CAACCGTTAC CGTCTTTAGT
TACCGAGTGC TTAGGATTGA ACTGACGGCT CAAGTGGGTA AAGATTTACA AAAACAGGCT
ACTAAACTGG CTCAACAAGT TAGTAATTTA CTGATTAACC AAGTTGATCA AGTAACTTTA
ATAAGCTTAT CTAATGTCTT TCAAAACGAA TTAAATTTGA TTAATAGTCG CTATCCTAAA
AATCAAAATA CTATTCAACA AGAAATCCAA AAAAATAGTC AAATTTGGCA TCAATCTAAA
AAATCAAATC GTTTATTAGG AAACTATCTA AATAATCCAA TTTCTAGAGA ATTAAGAGAA
TATCAAAAGC ACTTCCCAAA TAATTACCAA ATTTTTGTCA CCGACAAATA TGGTGCGATC
GCTGGAACGA CTAACCTAAA TTTAGAGTAC AATCAAGGAG AGAAACAATG GTGGCAGCAA
ACTTGGAATA ATGGCAGAGG AGCAGTTTAT ATTGAAGAAC CACAATACAA TCAAGAGAAT
TTGTTATTAT TAGTTAATAT TGCTGTTCCT ATCTACAAGC GCAGTAATAG TCAAGCCAGT
GAAGTCATTG GGATTATTCA TACCAGTTAT AAAATAAGCC ATGCTTTATT ACCGTTATTA
CAAAATATCA ATTCAGGAAA AACAGGTCAT GCTTATTTAT TTGTTTCTCC CAAAAAATAT
TTCTCGGATT ATAAATTCGT TAATGAGACG AATCAAGAGT TAACTAAGTT TATTAGTTCA
TTAGCCAGTT ACAAGGAGAT TAAATATCAA GGGGAAAAAC GATTTTTTAG TAAAGCCTCT
GTTCAACCCA AAAATCAGGA ATTTTCTCTT TTAAATAACT TACCTTGGCT AATTATTATT
TATCAAGATA GTAGTGAAAT TCTGCATCCC CTGATCATTG CCCGACAAAC GATCATGATG
GCAGCTTTAG GAACATTACT GGTCGCGGGG ATCTTAGCCT CATTTATTGA ACGATTAATT
AGTACTCCTA TTCGAGTTTT AACAAAGATA ACTCAACGGA TTGCTTCAGG GGATTTGGAC
TATGAAATTG ACTTAGAACA AAAGGATGAA ATTGGGTTAC TTGCAGCCAA TTTTAATATC
ATGGTTGAAT CCCTAAAAAG TTACTTTTCT AAGTTAAGAA CATCCCTAAA AGAATTATCA
GATATGAAAT TCGCCTTGGA TCAATCGGTA TTAGTCACCG TGATGGAACC CAATGGAAGA
ATCACCTATG TGAACGATAA ATTTTGTGAA ATTTCCCAAT ATTCTCGTCA AGAACTCATT
GGTAATAACT ATCGTTTTTT GAAATCTCGC TATCATACCC CTGAATTTTA TCAATCTATT
TGGGACACCC TTAATCAAGG GAACATTTGG CGAGGAGAAA TCAAGAATCA AACCAAAGAT
GGCTCCTATT ATTGGGTAGA TAGTACCATG GTTCCCTTTT TGGATGAAAA TAATAAACCC
TTTCAATACC TAGCCATTCG TTATGATATT ACCGCGCGTA AAGACTTTGA GGAAGCCTTA
TCACAAAAAG TTAAAGAACG CACTGATCAA CTCGCTCAAG CTAATCAAGA AATTATCCAA
CTCAATCACC AACTCCAAGG CGAAAACCTG CGTATGAGTG CTCAATTAAA TGTTGCCAGA
CAACTGCAAC AGATGGTGTT ACCGAAACCC GAAGAATTAG CTGCTATTAA AGGATTAGAA
TTAGCCGGGT TTATGGAACC GGCCGATGAA GTCGGGGGAG ATTACTACGA TGTCCTGGCA
ACGGATGACG TAGTTACTAT TAGTATCGGA GATGTTACGG GACATGGACT AGAAAGTGGT
ATCTTAATGA TTATGACCCA AACTGTGGTT CGGACTCTTA AGGAGATTCG AGAACATGAT
CCCGTAAAAT TTTTGGATAC CCTTAACCGT ACTCTCTACC GCAATATCGA ACGAATGAAC
TCGGACAGAC ACCTAACCCT TGCGGTGCTA AACTACTCTC ACAGGAGAGT CAGTCTAAGC
GGTCAACACG AAGAGGTCAT TTTTGTCCGT GCTGGTGGAG AATTGCAACG AATTGATACA
ATGAATCTGG GTTTTCCTAT TGGATTAGAT CAAAATATCA CAGACTTTAT TGATCAGATT
TCCCTAGAAT TACAGACTGG GGATGGATTA GTTTTATACA CTGATGGAAT TACTGAGGCG
AAAGACATTA ACAAAAATCA TTATGGAATT GAACGACTCT GTCAAGTCAT TCAGCAAAAC
TGGGAAAAAT CGGCTCAACA AATTCAGGAG CTAGTGATTC AAGATTTACA CGAACATATC
GGACAACAAA AAATCTTTGA TGATATAACT TTATTTGTTT TAAAACAAAA ATGA
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| Protein sequence | MNHWRILLTK KWANLSLRAK IILAFFSLMI VSTTTVTVFS YRVLRIELTA QVGKDLQKQA
TKLAQQVSNL LINQVDQVTL ISLSNVFQNE LNLINSRYPK NQNTIQQEIQ KNSQIWHQSK
KSNRLLGNYL NNPISRELRE YQKHFPNNYQ IFVTDKYGAI AGTTNLNLEY NQGEKQWWQQ
TWNNGRGAVY IEEPQYNQEN LLLLVNIAVP IYKRSNSQAS EVIGIIHTSY KISHALLPLL
QNINSGKTGH AYLFVSPKKY FSDYKFVNET NQELTKFISS LASYKEIKYQ GEKRFFSKAS
VQPKNQEFSL LNNLPWLIII YQDSSEILHP LIIARQTIMM AALGTLLVAG ILASFIERLI
STPIRVLTKI TQRIASGDLD YEIDLEQKDE IGLLAANFNI MVESLKSYFS KLRTSLKELS
DMKFALDQSV LVTVMEPNGR ITYVNDKFCE ISQYSRQELI GNNYRFLKSR YHTPEFYQSI
WDTLNQGNIW RGEIKNQTKD GSYYWVDSTM VPFLDENNKP FQYLAIRYDI TARKDFEEAL
SQKVKERTDQ LAQANQEIIQ LNHQLQGENL RMSAQLNVAR QLQQMVLPKP EELAAIKGLE
LAGFMEPADE VGGDYYDVLA TDDVVTISIG DVTGHGLESG ILMIMTQTVV RTLKEIREHD
PVKFLDTLNR TLYRNIERMN SDRHLTLAVL NYSHRRVSLS GQHEEVIFVR AGGELQRIDT
MNLGFPIGLD QNITDFIDQI SLELQTGDGL VLYTDGITEA KDINKNHYGI ERLCQVIQQN
WEKSAQQIQE LVIQDLHEHI GQQKIFDDIT LFVLKQK
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