| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0797 |
|---|
| Symbol | |
|---|
| ID | 8390104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 807429 |
|---|
| End bp | 808334 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644978816 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_003136571 |
|---|
| Protein GI | 257058683 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0108437 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTA GAACTCTCCA AACTATCCGT TCTTTATTCA TTGAAATTAC AGTTATTGTT
GCAAGTTTAG CTGTAATGAT GAATAGCTTG GCTGTACCGA ACAATTTGAC CCCTCAAGAC
AACGCTAAGA CCTTGATACA AAACCTTTCT CAGAAAACAG TTAGTGATTT TTCCCTTGAT
TCTTCTGCAT CCTTAAGTCC AAACTTAAAG ACTAATGGCA AATACTCAGC TTTGAAGAGA
ATTGACGTTA CCTTCAAGAA CCGAAATTAT TGGATTGCTC AAATTCCTAA TAAAACGGTC
GTTCTGACCT TTGATGATGG GCCGAGTCCT GATTATACGC CTAAAATTCT TGAAAAACTC
GCTCAATATA ACATCAAAGC AACGTTCTTT GTGGTAGGTC ATCGTGTTGA ACAATATTGC
GATCTTGTTG GTCAGATAGT AGACAAGGGA CACGAACTGG GTAATCATAC TTATTCTCAC
CCGCGCCAGA ATTTAACACA GCTTTCGGCT AAACAACAAG AACAAGAAAT CGCTAAAACT
CAGGAAGCTA TTAGGAAATG TGTCGGTGAA ACCCATGTTC CAAAATGGTT TAGAGCACCC
TACGGAGTTC AAAATCAAAT AACATTCACT ATTTTGAAAA AGCTCAATCT AAGTAGTGTA
CTCTGGTCGG TGGATACCAA TGACTGGCGC ATACAATCAA CCAGTCAAAC GATCGCTAAT
GATGTTATCG CTTCTCATGG TAAGGGAATT GTTTTGATGC ACGATGGTGT TTTTAATAGC
AATGCAACAG TTTCTAATAG GAATGCAACA GTTAATGCGC TAGATTTATT TCTCCAGCCA
ATGATTGATC AGAAAATTCA ATTTGTCACG CTATCGAAGG CCTTATCGCC AGAAAAAACA
GAATAA
|
|---|
| Protein sequence | MNSRTLQTIR SLFIEITVIV ASLAVMMNSL AVPNNLTPQD NAKTLIQNLS QKTVSDFSLD
SSASLSPNLK TNGKYSALKR IDVTFKNRNY WIAQIPNKTV VLTFDDGPSP DYTPKILEKL
AQYNIKATFF VVGHRVEQYC DLVGQIVDKG HELGNHTYSH PRQNLTQLSA KQQEQEIAKT
QEAIRKCVGE THVPKWFRAP YGVQNQITFT ILKKLNLSSV LWSVDTNDWR IQSTSQTIAN
DVIASHGKGI VLMHDGVFNS NATVSNRNAT VNALDLFLQP MIDQKIQFVT LSKALSPEKT
E
|
|---|
| |