| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0778 |
|---|
| Symbol | |
|---|
| ID | 8390085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 780042 |
|---|
| End bp | 780998 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644978797 |
|---|
| Product | pseudouridine synthase, RluA family |
|---|
| Protein accession | YP_003136552 |
|---|
| Protein GI | 257058664 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCAT GTTTAAATGC TTCTAATCAA ATTGAATTAA CCGTCCAAGA CAAAGGCGAT
CGCATTGATC TCTGGTTGTC CCAAAACCTT GATCAGATCT CCCGTTCTCA CCTACAAAAA
CTGATCGAAC AGGGGAATAT TTACCTCAAT AATCAAGTTT GTCTTAACAA AAAAACCAAG
GTTAATTCCG GCGATCGCCT CCAGGTTTTT CTCCCCCCTC CCGAACCCTT GGAACTCCAA
CCCGAACCTA TTCCCCTTGA TATTCTCTAC GAAGATGATA GCCTTATTAT TATCAATAAA
TCTGCGGGGT TAGTCGTTCA TCCTGCCCCT GGACACACCA CTGGAACCCT CGTCCATGGG
TTACTGTATC ACTGCCCCAA TTTAGTCGGA ATTGGGGGGA TACAACGGCC AGGGATCGTC
CATCGTCTCG ATAAGGATAC CACAGGGGCG ATCGTCGTCG CTAAGACCGA TTATGCCCAT
CAACACCTAC AAGCCCAACT CAAAGCCAAA ACTGCCCGAC GAGAGTATTT AGGGGTGGTT
TACGGGGTTC CCCGTCATGA AGACACCCAT CAAGGGACAA TTAACGTACC CATTGGTCGT
CATCGAGGCG ATCGCAAAAA AATGGCCGTC GTTCCAGTGG AAAACGGTGG ACGGGAAGCC
ATTACCCATT GGCAAATTGT TGAAAGATTG GGTAACTATA CCTTAGTGGA ATTTCGGCTA
GAAACGGGAC GTACCCATCA AATACGGGTT CATAGTAGTT ATATTGGTCA TCCTATCGTG
GGTGATCCTC TCTATAGTTC TGGGGGGTCT GTGGGGGTTA ATCTATCAGG ACAAGCTTTA
CACGCCTACC GTCTAATTTT AGAGCATCCC GTCACGGGGA ACACCATTGA AGCGATCGCA
CCTTTACCTG CTGAATTTAC CAAGCTTTTA ACGCTTCTCC GCCAAAAATT ATCTTGA
|
|---|
| Protein sequence | MNSCLNASNQ IELTVQDKGD RIDLWLSQNL DQISRSHLQK LIEQGNIYLN NQVCLNKKTK
VNSGDRLQVF LPPPEPLELQ PEPIPLDILY EDDSLIIINK SAGLVVHPAP GHTTGTLVHG
LLYHCPNLVG IGGIQRPGIV HRLDKDTTGA IVVAKTDYAH QHLQAQLKAK TARREYLGVV
YGVPRHEDTH QGTINVPIGR HRGDRKKMAV VPVENGGREA ITHWQIVERL GNYTLVEFRL
ETGRTHQIRV HSSYIGHPIV GDPLYSSGGS VGVNLSGQAL HAYRLILEHP VTGNTIEAIA
PLPAEFTKLL TLLRQKLS
|
|---|
| |