Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0689 |
Symbol | |
ID | 8389995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 694387 |
End bp | 695154 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644978709 |
Product | RNA polymerase sigma factor SigF |
Protein accession | YP_003136465 |
Protein GI | 257058577 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00117274 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTA AGTATAATAA CGCACAGGGG ATGGAACTGT TAATCACTTA TTCTCGTAAT CCTTCTCTTG CCTTGCGTAA TCAACTGGTT GAACTTCATA CGGGATTAGT TCGCCAGGTT GCCCATCGCA TTAGCAACCA ATGTACAGAA CCCTATGAAG ATTTAGAACA AATCGGCTAC TTAGGATTGA TTAATGCGAT TGAACGTTTT AATCCCCATC AAGGTTGTGC CTTTAGTTCC TTTGCCATTC CCTATATTCG CGGAGAAATG CTGCACTATC TGCGGGATAA AGGGAGTGTG ATGCGGATTC CTCGTCGTTG GCAAGAACTG TATAACAAAG GCAAAAAAGT TCGCAAACAG TTGACGACTA GCTTGGGACG AACTCCCAAG GATCAGGAAT TAGCTGATGC TTTACAGGTT TCTTTAGAAG AATGGCATGA ATGCGAACTG GCTTTACAAA ATCGGATGTT AGTCAGTCTC GATTCTACTA TCAATCAAAA CACCGATTCG ACCGTTAGTT TTGGCGAAAC TTTGCCTGAT CATCGCTATC AAGCTAAGCA AAGTCAAGAG GAAGATCGAT TACAATTACA ACGGGCGATG AGTCAGCTTG AAGACAAAAC CAAAGAAGCC ATTGAATGTG TCTTTATTAA GGAATTACCT CGCAAAGAAG CTGCTAAACG AATTGGCATG AGTCCTATGA CAGTCACTCG TCATTTACAC AAGGGAATTA AACAATTAAT TATCTTGTTA GAATCCCAAG TTGCTTAA
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Protein sequence | MKTKYNNAQG MELLITYSRN PSLALRNQLV ELHTGLVRQV AHRISNQCTE PYEDLEQIGY LGLINAIERF NPHQGCAFSS FAIPYIRGEM LHYLRDKGSV MRIPRRWQEL YNKGKKVRKQ LTTSLGRTPK DQELADALQV SLEEWHECEL ALQNRMLVSL DSTINQNTDS TVSFGETLPD HRYQAKQSQE EDRLQLQRAM SQLEDKTKEA IECVFIKELP RKEAAKRIGM SPMTVTRHLH KGIKQLIILL ESQVA
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