Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0667 |
Symbol | |
ID | 8389973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 671501 |
End bp | 673585 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644978688 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_003136444 |
Protein GI | 257058556 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.432948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA ATCGCATCCC TAGCCCAACT CACCCCCTTG GTGCTACAGT ATCTCCTGAT GGGGTTAATT TCTGTATTTT TTCCAAACAC GCTACAAGCA TCGAATTGCT CTTATTTGAT GAACCCAACG CCCCCCAACC CTCCAAAACC ATCAAATTAG ACCGTAAAAC TAACCGTATC CACTACTATT GGCACATTTT CGTTCCAGGG TTAAAAGCGG GACAAGTTTA CGCTTATCGG GTTCATGGCC CCTACGAACC ACAAAACGGT CATCGATTTG ATCCTAGCAA AGTTCTCTTA GATCCTTATG GTAAAGCCAT TGTTGGCTCA TCTATTTATA ACCGAGATGC TGCCGCACGA CCTGGAGATA ACTGTGCCCA AGCATTACGC AGCGTTGTTG TGGATAATAG TACCTACAAC TGGGAAGGGG ATCAACCCCT GAACACTCCC TACTCCGAAA CCATCATCTA TGAGATGCAC GTTGGAGGGT TTACCCGTCA CCCCAATTCA GGAACCCCAG AGGAAAAACG GGGAACCTTT GCCGGACTCA TTGAAAAAAT TCCCTATCTC AAAAGTTTAG GCATTACCGC CGTAGAATTA CTTCCCGTAC ACTATTTTGA TCCCGAAGAC TGTCCCCCTG GACTGACCAA TTATTGGGGG TATAGTACCA TTAACTTCTT TACTCCCCAT CGTAGCTACA GTTCCGACAA AAGTCCCCTC GGTCCAATTA ATGAATTTCG GGACATGGTA AAAGCGTTAC ATCGAGAGGG TATTGAAGTC ATCCTAGACG TAGTATTTAA CCACACGGCT GAAGGGGACG ACCGAGGACC AACCCTTTCC TTTCGGGGAA TAGATAATGC TACTTACTAC ATCCTAGAAG ATAAGGATCT GAGCGGTTAC ACGAATTATA GCGGGTGTGG TAACACTTTT CGAGGTAATC ATCCCATTGT TGCCCGTCTC ATCCTTGAAT CACTGCATTA CTGGGTGTCA GAAATGCACG TTGATGGGTT TCGCTTTGAC TTAGCCTCTA TCCTAACCAG AGATACCAGT GGTCATCCCA TCAAAGATCG TCAAGCATTG GATTTATTGT GGGTTATTGA ATCCGATCCC ATTTTAGCAG GGACTAAACT CATTGCAGAA GCTTGGGATG CAGCCGGACT CTATGATGTG GGACGTTTTG TGGAATTAGC GGACTGGTTT GCTGAGTGGA ATGGTCCCTT TCGGGATGAT GTCCGTCGCT TCGTTCGTGC AGAACCCGGA ATAGTGGGTA AGTTAGCCGC ACGAATTTTA GGAAGTCCTG ATATCTACCA TCGCACCGAA ATTGATATTA ACCGTAGTAT TAACTTTGTG ACTTGTCATG ATGGGTTTAG TTTGGCTGAT CTCGTTTCCT ATAACCAAAA GCATAATGAG GCGAACCGAG AAAATAACCG CGATGGGTCT AATGATAACT TTAGCTGGAA CTGCGGGGTA GAAGGAGAAA CAGAAAACCC GCAAATTAGA GCCCTACGCT TGCAACAGAT CAAAAATTTC CTAACCATTC TCTTTATTTC CCAAGGAACC CCCATGATTT TGATGGGAGA TGAAGTTGCT CGAACTCGTA AGGGGAATAA TAATGTTTAT TGCCAAGATA ATGAGTTAAG TTGGTTTGAT TGGGATGATG TAGAGCGACA ATTTGATTTA TGGTGCTTTT TACGCAAGAT AATTCATTTT ACCCAAGGGT TACAACTTTT CCGCCAAGAA GAACGCTTAG TCGTCGGTTC AAGTCATAAT CATCCCCATA TTACCTGGCA TGGCGCGATA TTGGGTAAAC CAGACTGGTC TACTGAGTCT CGACAGTTAG CGTTTAGTTT AAGTCATCCT GAAGCGAATG AATACTTGCA CGTTATTCTT AATGCTCATT GGGAGGGTCT TGATTTTGAG TTACCTCCGC TTAACCATGA TAAATGTTGG CATCGTATTA TTGATACGGC ATTACCTTTA TCGAAGAGTT TTTGTGAATT GGATGCGGCT GATCCCATTT CTGATAACAA ATATTATGTA CACGGACGAG CTTCTGTGGT GTTGATGGTT AAACCGAGAT CGTAG
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Protein sequence | MIRNRIPSPT HPLGATVSPD GVNFCIFSKH ATSIELLLFD EPNAPQPSKT IKLDRKTNRI HYYWHIFVPG LKAGQVYAYR VHGPYEPQNG HRFDPSKVLL DPYGKAIVGS SIYNRDAAAR PGDNCAQALR SVVVDNSTYN WEGDQPLNTP YSETIIYEMH VGGFTRHPNS GTPEEKRGTF AGLIEKIPYL KSLGITAVEL LPVHYFDPED CPPGLTNYWG YSTINFFTPH RSYSSDKSPL GPINEFRDMV KALHREGIEV ILDVVFNHTA EGDDRGPTLS FRGIDNATYY ILEDKDLSGY TNYSGCGNTF RGNHPIVARL ILESLHYWVS EMHVDGFRFD LASILTRDTS GHPIKDRQAL DLLWVIESDP ILAGTKLIAE AWDAAGLYDV GRFVELADWF AEWNGPFRDD VRRFVRAEPG IVGKLAARIL GSPDIYHRTE IDINRSINFV TCHDGFSLAD LVSYNQKHNE ANRENNRDGS NDNFSWNCGV EGETENPQIR ALRLQQIKNF LTILFISQGT PMILMGDEVA RTRKGNNNVY CQDNELSWFD WDDVERQFDL WCFLRKIIHF TQGLQLFRQE ERLVVGSSHN HPHITWHGAI LGKPDWSTES RQLAFSLSHP EANEYLHVIL NAHWEGLDFE LPPLNHDKCW HRIIDTALPL SKSFCELDAA DPISDNKYYV HGRASVVLMV KPRS
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