Gene Cyan8802_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_0417 
Symbol 
ID8389722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp410265 
End bp412955 
Gene Length2691 bp 
Protein Length896 aa 
Translation table11 
GC content43% 
IMG OID644978454 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_003136211 
Protein GI257058323 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0485913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGATA ATCTAGACTT AAGCAATTGC TCCATGCTAG ATCTGTTCAG CATGGAAGTA 
GAAAGTCAAG GGGAAGTCCT CAACGATAAC CTCTTGAACT TAGAAAATCA ACTTCAGGAG
TCCCAAGGAC AAGCCAGTGC TAGTTCCCTT GCCTTATTAG AGTCCCTGAT GCGAGCCTCT
CACTCCATCA AGGGAGCCGC TCGAATTGTC CAACTTGAAC CCGCCGTCAG AATTGCCCAT
GTCATGGAAG ATTGCTTTAT GGCGGCCATG GATCGCACCA TTAATTTGCA ATCGGACCAC
ATTGATCTGC TCTTACAAGC CGTCGATTTT CTCCTAGCCA TTGGTCAAGT GGGAGAAGCC
AATATCAATC ATTGGCTTGG AGAACATCAA GGGGAAGCAG AACAATTAGT GATCTCTATT
GCTTCCATCA TGGGAAGACG CAAAAGCGAT CGCGGTTCTG ATAAAAGTCC TCAAACACAA
CGAACCACAA CGACTCCACA ACCCCCACCC CCTTCCCCGG CAAAAAGTCA AAAAATCCCC
AAGACTCCAG AACTTTTAAC CCCTCCTCCA TCGAACTCAA ACCGTCGAAA AACCCCAGAA
ACCCCAGAAG ACGAATTTTT CTTAGGATCT ACCCTAGAAG CTGACGAAGA GCCAGAAAAC
TCAAGTTTTC GAGATTTTGA ACTCTCCTTA GATGATGTCT TTTCTGAGGA TACAGATATA
CAGTTAGGTA AATCCAAGTA TATACAAGAT ATTTCTGATA TTTCTGAGGA GGAGTCAACC
GGAAATCTGC TCACTGAGTC AGCGTCAAAA TTAGAGTCCA CTTTTGACCT ATCCGAAGAA
GTGATGACTT GGGTAGAAGA CGACAACGAA CCGATTAGTC AAGGGACTTC TTCCCTAACC
TCTACCCCAA AAGATGAACC CATCACCTCT ATCTCATCAG GCGGCGGTTC TTCTAAAGAT
CGTTTTGTCC GAGTAAGTGC AGAAGGCTTA AATCGCCTCA TGGGATTAGC GGGAGAATCC
CTCGTGGAAG CGACGGCCTT AAGTCCGATG GCAGACTCCT TTATCACCCT CAAACGCAGT
CAACTGGATT TATCGCGCTT GCTCGAACAA TTACAAATGA TCTTGAGTCA GCTTTCTTTA
GGCAAAGAAA TGGACGACTT TATCACTGAT ATTGTCGAAA AAGAGCGAGA ATGTCGCACC
ATTTTAGGCG ATCGCCTCAG TGACCTAGAA CAATTTGCCT ATCGTTCCTT TAATTTATCC
GATCGCCTCT ATCGAGAAGT GATCGCCACC CATATGCGTC CCTTTGAAGA AGGAGTCACC
GGGTTTCCGC GCATGGTACG AGATATATCC CGAAAACTGA ATAAACGAGT CAAATTAGAG
ATTGCCGGAC GCATGACCAT GGTAGATCGG GATATTCTGC GAAAATTAGA AGCCCCTCTG
ACCCATATTT TAAGCAACTC CATCGATCAT GGCATTGAAT CCCCTGAAGA ACGGGTCAAA
AAAGGAAAAC CTCCAGAGGG ACATATTCTC CTCGAAGCAA GTCATCGTTT TGGGATGCTA
TCGATTAATG TGATAGACGA CGGACGGGGA ATTGAACTGG AGAAATTGCG TCAATCAATC
GTTGATAAAG GATTAGTTCC CGCAGAAATG GCCAAACAAC TCAATGAAGC TGAGTTGATG
GAATTTATCT TTTTACCCAA TTTTTCCACC AGTAAGACCG TCACCGATAT CTCCGGTCGT
GGGGTGGGAT TAAATATTGC GAAAACTATG GTACAAGAAG TTGGAGGCAA CCTTCAGGCA
GTTTCTCGGC CAGGAGAAGG TATGAGTTTT CATTTCCAAT TACCTCTAAC CCTTTCGGTG
ATTCGCACCC TTTTAGTCGA TATTGCTGGT CAACCCTACG CCTTCCCCTT ATCCCGTATC
GATCAAATTT TGACCCTCAA TTATAAAGAT ATTCACTCCG TAGAAAATCG ACAATACTTT
ACCCTGGAAG GGCAAAATAT TGGCTTAGTT AGAGCCGACC AAGTGTTAAA TATTTCGTCT
CCGGCTTCTC CCTTAGAACC CCTATCAATT GTTATTTTAA GTGACCAAAC TAATCGCTAT
GGCTTGGTTG TTGATCGCTT TATTGGGGAA AAAAGTTTAG TGGTTCGTCC CTTAGATTCT
CGCTTAGGAA AAGTTCAAGA TATTAGTGGT GCAGCCATTC TCGAAGATGG TTCGCCGATT
CTTATTTTAG ATGTGTTAGA TTTAGTGCGA TCGCTTGATA AACTCTTGGC TAATGTTCAA
GTTAATCAAA TTAAAACCGA GGAAGAAGCA GAGTGGAAAG AAAATAAAAA GCATATTTTA
GTCGTTGACG ATTCCATTAC CGTCCGAGAA ATGGAAAAAA AATTATTGCA AAATCAGGGC
TATCTTGTGG ATGTCGCTGT TGATGGAATG GAAGGGTGGA ATGCCGTGCG AATGGGCAAT
TATGACCTCG TGATTAGTGA TATAGATATG CCCCGGATGA ATGGGATTAA ATTAGTCAGT
CAAATCAAAA ATCATCCTAA TTTAAAATCA ATCCCTGTGA TTATTGTTTC CTATAAAGAT
CGCGAAGAAG ATCGCCTACA AGGCTTAGAA GCAGGAGCCG ATTATTACTT AACAAAAAGT
AGTTTCCATG ATGATACTTT AATCAATGCC GTTGTTGATT TAATTGGGTA A
 
Protein sequence
MRDNLDLSNC SMLDLFSMEV ESQGEVLNDN LLNLENQLQE SQGQASASSL ALLESLMRAS 
HSIKGAARIV QLEPAVRIAH VMEDCFMAAM DRTINLQSDH IDLLLQAVDF LLAIGQVGEA
NINHWLGEHQ GEAEQLVISI ASIMGRRKSD RGSDKSPQTQ RTTTTPQPPP PSPAKSQKIP
KTPELLTPPP SNSNRRKTPE TPEDEFFLGS TLEADEEPEN SSFRDFELSL DDVFSEDTDI
QLGKSKYIQD ISDISEEEST GNLLTESASK LESTFDLSEE VMTWVEDDNE PISQGTSSLT
STPKDEPITS ISSGGGSSKD RFVRVSAEGL NRLMGLAGES LVEATALSPM ADSFITLKRS
QLDLSRLLEQ LQMILSQLSL GKEMDDFITD IVEKERECRT ILGDRLSDLE QFAYRSFNLS
DRLYREVIAT HMRPFEEGVT GFPRMVRDIS RKLNKRVKLE IAGRMTMVDR DILRKLEAPL
THILSNSIDH GIESPEERVK KGKPPEGHIL LEASHRFGML SINVIDDGRG IELEKLRQSI
VDKGLVPAEM AKQLNEAELM EFIFLPNFST SKTVTDISGR GVGLNIAKTM VQEVGGNLQA
VSRPGEGMSF HFQLPLTLSV IRTLLVDIAG QPYAFPLSRI DQILTLNYKD IHSVENRQYF
TLEGQNIGLV RADQVLNISS PASPLEPLSI VILSDQTNRY GLVVDRFIGE KSLVVRPLDS
RLGKVQDISG AAILEDGSPI LILDVLDLVR SLDKLLANVQ VNQIKTEEEA EWKENKKHIL
VVDDSITVRE MEKKLLQNQG YLVDVAVDGM EGWNAVRMGN YDLVISDIDM PRMNGIKLVS
QIKNHPNLKS IPVIIVSYKD REEDRLQGLE AGADYYLTKS SFHDDTLINA VVDLIG