Gene Cyan8802_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_0393 
Symbol 
ID8389698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp385241 
End bp386434 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content47% 
IMG OID644978431 
ProductHtrA2 peptidase 
Protein accessionYP_003136188 
Protein GI257058300 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCTG GAAATTTGCT ACGCCGATGG AGTAGTCATT TGATGTCACT CTTTCTTGGC 
GTACTTCTGT GCTTTGGTGG CTTCCACTTC CTATCCTCTC AAGCTCAACC CTTAGCCCCA
CTGTCTTTAC AAGAACCCTT AACTGTCGCC ATAACCCCAA ATTTAGGGAG TAGCGATAGT
TTTGTTTCGG CTGCGGTTGC TCGAACCGGA CCGGCAGTCG TCCGAATTGA TACAGAAACC
GTGGTGACAC GACAAATGGA TCCATTTTTT GATGATCCCT TTTTCCGCGA ATTTTTTGGG
CAACAGTTTC GTGTTCCTCC CCAACAACAA CGGATTACGG GTCAGGGTTC GGGGTTTATT
ATTGATGGAG ATGGAATTAT TCTCACTAAC GCCCATGTAG TTAATAATGC TAGTAAAGTA
ACCGTTACCC TCAAAGATGG CCGCACCTTT AATGGACAAG TCCGAGGAAC CGATGAGGTA
ACGGACTTAG CGGTGGTCAA AATTAATACC CAAGGGGCAA AATTGCCAGT AGCTCCCCTA
GGAGATTCGA CTAACCTCCA AGTGGGAGAT TGGGCGATCG CGGTAGGAAA TCCCGTGGGA
TTGGATAATA CTGTCACCCT AGGTATTATT AGTACCATTG GCCGTTCTGC GGCGAAAGCG
GGTATCCCCG ATAAACGCCT CGATTTTATT CAAACCGATG CCGCCATTAA CCCGGGCAAT
TCTGGGGGTC CGCTATTGAA TGCTCAAGGG GAAGTCATTG GTATTAATAC GGCGATTCGG
GCTGATGCTA TGGGAATTGG CTTTGCTATT CCTATTAATA AGGCAAAAGC TCTACAAAAT
ACCTTAGCAT CAGGAGAAAA GGTTCCTCAT CCCTATATTG GGGTGCAAAT GGTCAATTTA
ACGCCTGAAT TAGCCAGGGA AAATAATCAA AATCCCAATT CTCCCCTGAT GGTTGCAGAA
GTCAACGGCA TTTTAGTGGT ACAAGTTATT CCCAATACTC CGGCAGCTAC CGCAGGGATT
CGTCGCGGAG ATGTCATTGT GGGGGTCAAT GGACAACCAG TGACTGATGG CTCTCAATTA
CAGTCGATTG TGGAAAATTC CGGACTGAAT GCCTCCCTGA AACTGAAACT CTATCGAGGA
GATCGCCTGA TGGATGTCAC GGTTAAAACT GCCCAATTAG AAGGAAATTC TTAA
 
Protein sequence
MKSGNLLRRW SSHLMSLFLG VLLCFGGFHF LSSQAQPLAP LSLQEPLTVA ITPNLGSSDS 
FVSAAVARTG PAVVRIDTET VVTRQMDPFF DDPFFREFFG QQFRVPPQQQ RITGQGSGFI
IDGDGIILTN AHVVNNASKV TVTLKDGRTF NGQVRGTDEV TDLAVVKINT QGAKLPVAPL
GDSTNLQVGD WAIAVGNPVG LDNTVTLGII STIGRSAAKA GIPDKRLDFI QTDAAINPGN
SGGPLLNAQG EVIGINTAIR ADAMGIGFAI PINKAKALQN TLASGEKVPH PYIGVQMVNL
TPELARENNQ NPNSPLMVAE VNGILVVQVI PNTPAATAGI RRGDVIVGVN GQPVTDGSQL
QSIVENSGLN ASLKLKLYRG DRLMDVTVKT AQLEGNS