| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0347 |
|---|
| Symbol | |
|---|
| ID | 8389651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 336203 |
|---|
| End bp | 337288 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644978385 |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_003136143 |
|---|
| Protein GI | 257058255 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGGC AATACTGCAT AACCCTTCTT CCTGGCGATG GCATTGGACC CGAAATCTTA
GCCGTTACGG TAGATGTCCT CAAAATTATT GGTCAGCAAT TTGACATCAC CTTTAACTTC
CAAGAAGCCC TCATCGGTGG GTCTGCCATT GATGCCACAG GAAACCCCCT CCCCGAAGAA
ACCCTCACCC TCTGTCGTAA CAGTGATGCC GTCCTATTAG CCGCCATTGG GGGCTATAAA
TGGGATAATC TGCCCCGTCA TCAACGGCCT GAAACGGGAC TCCTAGCCAT TCGTGCGGGA
CTAAACCTCT TTGCCAATTT GCGTCCGGCC ACCATTTTGC CCCAATTGGT CGATGCCTCC
TCCCTAAAAC GGGAAGTCGT CGAAGGAGTC GATATTATGG TCGTTCGAGA ATTGACTGGG
GGCATTTATT TCGGCCAGCC TAAAGGCATT TTTGAAACGG AAACCGGGGA AAAACGGGGA
GTCAACACCA TGGCCTATAC CGAGTCAGAA ATTGACCGCA TCGCTCAAGT AGCCTTTGAA
ACCGCCCAAA AACGGGGCAA AAAATTGTGT TCCGTTGATA AGGCAAATGT GTTAGATGTG
TCTCAATTAT GGCGCGATCG CGTCACGTTA ATGGCTGACC GATACCCCGA TGTCGAACTA
TCTCACCTCT ACGTTGATAA CGCAGCTATG CAGCTTGTGC GGGCTCCCAA ACAATTTGAT
ACCATCGTCA CGGGTAACTT ATTTGGAGAT ATCCTCTCGG ATGCGGCAGC GATGTTAACC
GGAAGCATTG GAATGTTACC CTCGGCGAGT TTAGGATTGG GAAAACCAGG ATTATTTGAA
CCCGTTCACG GTTCTGCCCC CGATATTGCC GGTCAAGATA AGGCAAACCC CTTGGCACAA
GTCCTCAGCG CAGCGATGAT GTTACGCTAT GGGTTAGATG AACCCGAAGC AGCCACTAAG
ATTGAACAGG GTGTTTTAGC GGTACTCGAT CAAGGCTATC GCACAGGGGA TATTATGTCT
CCAGGAATGA AAGCCGTCGG ATGTAAAGCG ATGGGAGAAG CTTTGGTGAA AGTTTTGGAA
TCATAA
|
|---|
| Protein sequence | MTRQYCITLL PGDGIGPEIL AVTVDVLKII GQQFDITFNF QEALIGGSAI DATGNPLPEE
TLTLCRNSDA VLLAAIGGYK WDNLPRHQRP ETGLLAIRAG LNLFANLRPA TILPQLVDAS
SLKREVVEGV DIMVVRELTG GIYFGQPKGI FETETGEKRG VNTMAYTESE IDRIAQVAFE
TAQKRGKKLC SVDKANVLDV SQLWRDRVTL MADRYPDVEL SHLYVDNAAM QLVRAPKQFD
TIVTGNLFGD ILSDAAAMLT GSIGMLPSAS LGLGKPGLFE PVHGSAPDIA GQDKANPLAQ
VLSAAMMLRY GLDEPEAATK IEQGVLAVLD QGYRTGDIMS PGMKAVGCKA MGEALVKVLE
S
|
|---|
| |