Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0294 |
Symbol | |
ID | 8389598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 283716 |
End bp | 285773 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644978335 |
Product | integrins alpha chain |
Protein accession | YP_003136093 |
Protein GI | 257058205 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTTA ATCTATTATT GCAATCAAGT CGTAGAAATA AGTTTTTAAT ACTATTTTCG ACTATTTTAC TATTGATTAT TCCTCTTCAA TACCACTACT CTCAAGATAT AACTAGCAAG TGGTTTATCA GCAAACCGAT AGTTTTCAAT GCTTACAATT TATTTGACGT AGGTGTCACT GATATTAACA ATGACAATAA TCTTGATATA TTTACGACCA ACCATAATTC TCTAAATAAT TTAATGATTG GTGATGGCAA GGGAAATTTT ACTGATGTAG TTTCTCAGTG GAAGTTTGAC CATATTGCCG AATTTCCAGG ATTCGCTGAT TCAGAAAAAG AACCTAAATT TGAGACTCCC GGATTATATG TATTTTGGCA TAAGAGAACC TTGATAATCA AAAATTATAA AATGAATAAT CCTCAACAAT TAGATGGAGA AATCCAAATA TTATCAGAGG TTAAGATTGA GAATGATTCA TTAAGTAAAG TAAGTTTCAC ACAAAACCAG TTATCTAACT CAGAAGTAAA GACACAAATT AATTTTGAAC TCGCAAAAGA TAGCTGGTTA ACAATAACTC CTAAAGATCC TATGCAAACT TCTTTACAAT TGAATGAAAA TATTCCCTTG AAGAATGTTT ATGTCGGTCT TCAAAAAGTA AATCCAAAGA CTCATAATTT AGATTTGAAA ATTTTAAGAG ATCGCCATAG TATTTCTTGG GCAGACTATA ACAGTGATGG AAATATTGAT GCCTTTATAA CTCGTAGTGG AGGCAGCCTT AGTTCTAAAG AACGTTTTAG GAAAATTTTT CAGCGTCATC TTTTATCTAA TCGAGGTAAC TTCTTTGAAG ACGTGACTGA AAAATCAGGA ATTGTAGAGA CTGCTTGTCG AGCAGTTACA GCAGCATGGG TTGATTTTGA TAACAACAAC AGTCTTGAAC TTTATGTTGT GTGTATTGAT GGAACAAGTC GTTTATATCA AAAGAACAAT AACGGAAAAT TTGTTGATAT TGCCGTAAAA GTTGGACTAA GTCCATCACA AACTACTCCT GACCAAGCAG GTTGGAATAA AAACGGGCTT TTTGTTTGGC TTGATACGGA TGCAGATGGA GACGTAGATT TATTAAGATC TTATCAAAAT TCCTTGAAAT TGTATGTTAA TGAATTAGGC TTATTTAAAG AAAAAACAAT TACTCCTCAC TCTCCGTTAA TAGATATCTT TAGCTCAAAG TTTAGCGTTA CAGATTATGA TTTAGATGGA GACTTAGATA TTCTTTTTGT TTCAGGATAT GGAAGCATCT TGTTAAAAAA CCTAGATGGA GAGTATGCTT TAACTAATCC GAGTAATATT GGTTTGCCTG ATAATCCCTT AATAGCTAAT TGGGTAGATT ATGATAATGA TGGTTTCCCA GATGTCCATA TGATACCAGG GGGAATTTAT CATCAGCTAC CTAACCATAA TTTTACCAAA GCACATATTT TGGATCGTGA ATTTATTGGT TTATCATTTC CTCTAGATCC TCAATGTATT TGGTTTGATT TTGATAATTC TGGAACTCAA GACGTGCTCA TGACATCTTT ACCTTATCAT CATTGGAAAT CAGTTTTTTG GAATTTTTCA GTCTCCCCTA ATATGAGTTT TATCAATGGT TGGCTTCAGA GAAATTTACA TCCTCACAGT GAGTTTAAAA ATCTTAGGGA AGACCGCCTA AAAACGGCTG ACCATACAAA AAGTGACTTT GTTTGGCAAG GAAAACTTTA TGGTAATATT AACTCTCAAA ATCACTGGCT TCAGATTAAG CTAATAGGTC TGCCTAAAAA TCCTCAAGCA ATAGGTGCTA AAGTAATTAT GGTTACTGAT CATGGTCAAC TCTTGCAGCA GGTTGGAGCA ATGGAAAACT CTCGTTACTC CCAAGGGTAT TCTCCCTTGC ATTTTGGTTT AGGAAAGAAC AAAAGGCCTA AGCTTATTAA AATTTTTTGG AATGACGGCA AATTCCAAGA AATTCAACAG CCTGAAGGAG ATAAACTATT AATCATTAAA CGGGAATCTA ACTTGTAA
|
Protein sequence | MKLNLLLQSS RRNKFLILFS TILLLIIPLQ YHYSQDITSK WFISKPIVFN AYNLFDVGVT DINNDNNLDI FTTNHNSLNN LMIGDGKGNF TDVVSQWKFD HIAEFPGFAD SEKEPKFETP GLYVFWHKRT LIIKNYKMNN PQQLDGEIQI LSEVKIENDS LSKVSFTQNQ LSNSEVKTQI NFELAKDSWL TITPKDPMQT SLQLNENIPL KNVYVGLQKV NPKTHNLDLK ILRDRHSISW ADYNSDGNID AFITRSGGSL SSKERFRKIF QRHLLSNRGN FFEDVTEKSG IVETACRAVT AAWVDFDNNN SLELYVVCID GTSRLYQKNN NGKFVDIAVK VGLSPSQTTP DQAGWNKNGL FVWLDTDADG DVDLLRSYQN SLKLYVNELG LFKEKTITPH SPLIDIFSSK FSVTDYDLDG DLDILFVSGY GSILLKNLDG EYALTNPSNI GLPDNPLIAN WVDYDNDGFP DVHMIPGGIY HQLPNHNFTK AHILDREFIG LSFPLDPQCI WFDFDNSGTQ DVLMTSLPYH HWKSVFWNFS VSPNMSFING WLQRNLHPHS EFKNLREDRL KTADHTKSDF VWQGKLYGNI NSQNHWLQIK LIGLPKNPQA IGAKVIMVTD HGQLLQQVGA MENSRYSQGY SPLHFGLGKN KRPKLIKIFW NDGKFQEIQQ PEGDKLLIIK RESNL
|
| |