Gene Cyan8802_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_0294 
Symbol 
ID8389598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp283716 
End bp285773 
Gene Length2058 bp 
Protein Length685 aa 
Translation table11 
GC content33% 
IMG OID644978335 
Productintegrins alpha chain 
Protein accessionYP_003136093 
Protein GI257058205 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTA ATCTATTATT GCAATCAAGT CGTAGAAATA AGTTTTTAAT ACTATTTTCG 
ACTATTTTAC TATTGATTAT TCCTCTTCAA TACCACTACT CTCAAGATAT AACTAGCAAG
TGGTTTATCA GCAAACCGAT AGTTTTCAAT GCTTACAATT TATTTGACGT AGGTGTCACT
GATATTAACA ATGACAATAA TCTTGATATA TTTACGACCA ACCATAATTC TCTAAATAAT
TTAATGATTG GTGATGGCAA GGGAAATTTT ACTGATGTAG TTTCTCAGTG GAAGTTTGAC
CATATTGCCG AATTTCCAGG ATTCGCTGAT TCAGAAAAAG AACCTAAATT TGAGACTCCC
GGATTATATG TATTTTGGCA TAAGAGAACC TTGATAATCA AAAATTATAA AATGAATAAT
CCTCAACAAT TAGATGGAGA AATCCAAATA TTATCAGAGG TTAAGATTGA GAATGATTCA
TTAAGTAAAG TAAGTTTCAC ACAAAACCAG TTATCTAACT CAGAAGTAAA GACACAAATT
AATTTTGAAC TCGCAAAAGA TAGCTGGTTA ACAATAACTC CTAAAGATCC TATGCAAACT
TCTTTACAAT TGAATGAAAA TATTCCCTTG AAGAATGTTT ATGTCGGTCT TCAAAAAGTA
AATCCAAAGA CTCATAATTT AGATTTGAAA ATTTTAAGAG ATCGCCATAG TATTTCTTGG
GCAGACTATA ACAGTGATGG AAATATTGAT GCCTTTATAA CTCGTAGTGG AGGCAGCCTT
AGTTCTAAAG AACGTTTTAG GAAAATTTTT CAGCGTCATC TTTTATCTAA TCGAGGTAAC
TTCTTTGAAG ACGTGACTGA AAAATCAGGA ATTGTAGAGA CTGCTTGTCG AGCAGTTACA
GCAGCATGGG TTGATTTTGA TAACAACAAC AGTCTTGAAC TTTATGTTGT GTGTATTGAT
GGAACAAGTC GTTTATATCA AAAGAACAAT AACGGAAAAT TTGTTGATAT TGCCGTAAAA
GTTGGACTAA GTCCATCACA AACTACTCCT GACCAAGCAG GTTGGAATAA AAACGGGCTT
TTTGTTTGGC TTGATACGGA TGCAGATGGA GACGTAGATT TATTAAGATC TTATCAAAAT
TCCTTGAAAT TGTATGTTAA TGAATTAGGC TTATTTAAAG AAAAAACAAT TACTCCTCAC
TCTCCGTTAA TAGATATCTT TAGCTCAAAG TTTAGCGTTA CAGATTATGA TTTAGATGGA
GACTTAGATA TTCTTTTTGT TTCAGGATAT GGAAGCATCT TGTTAAAAAA CCTAGATGGA
GAGTATGCTT TAACTAATCC GAGTAATATT GGTTTGCCTG ATAATCCCTT AATAGCTAAT
TGGGTAGATT ATGATAATGA TGGTTTCCCA GATGTCCATA TGATACCAGG GGGAATTTAT
CATCAGCTAC CTAACCATAA TTTTACCAAA GCACATATTT TGGATCGTGA ATTTATTGGT
TTATCATTTC CTCTAGATCC TCAATGTATT TGGTTTGATT TTGATAATTC TGGAACTCAA
GACGTGCTCA TGACATCTTT ACCTTATCAT CATTGGAAAT CAGTTTTTTG GAATTTTTCA
GTCTCCCCTA ATATGAGTTT TATCAATGGT TGGCTTCAGA GAAATTTACA TCCTCACAGT
GAGTTTAAAA ATCTTAGGGA AGACCGCCTA AAAACGGCTG ACCATACAAA AAGTGACTTT
GTTTGGCAAG GAAAACTTTA TGGTAATATT AACTCTCAAA ATCACTGGCT TCAGATTAAG
CTAATAGGTC TGCCTAAAAA TCCTCAAGCA ATAGGTGCTA AAGTAATTAT GGTTACTGAT
CATGGTCAAC TCTTGCAGCA GGTTGGAGCA ATGGAAAACT CTCGTTACTC CCAAGGGTAT
TCTCCCTTGC ATTTTGGTTT AGGAAAGAAC AAAAGGCCTA AGCTTATTAA AATTTTTTGG
AATGACGGCA AATTCCAAGA AATTCAACAG CCTGAAGGAG ATAAACTATT AATCATTAAA
CGGGAATCTA ACTTGTAA
 
Protein sequence
MKLNLLLQSS RRNKFLILFS TILLLIIPLQ YHYSQDITSK WFISKPIVFN AYNLFDVGVT 
DINNDNNLDI FTTNHNSLNN LMIGDGKGNF TDVVSQWKFD HIAEFPGFAD SEKEPKFETP
GLYVFWHKRT LIIKNYKMNN PQQLDGEIQI LSEVKIENDS LSKVSFTQNQ LSNSEVKTQI
NFELAKDSWL TITPKDPMQT SLQLNENIPL KNVYVGLQKV NPKTHNLDLK ILRDRHSISW
ADYNSDGNID AFITRSGGSL SSKERFRKIF QRHLLSNRGN FFEDVTEKSG IVETACRAVT
AAWVDFDNNN SLELYVVCID GTSRLYQKNN NGKFVDIAVK VGLSPSQTTP DQAGWNKNGL
FVWLDTDADG DVDLLRSYQN SLKLYVNELG LFKEKTITPH SPLIDIFSSK FSVTDYDLDG
DLDILFVSGY GSILLKNLDG EYALTNPSNI GLPDNPLIAN WVDYDNDGFP DVHMIPGGIY
HQLPNHNFTK AHILDREFIG LSFPLDPQCI WFDFDNSGTQ DVLMTSLPYH HWKSVFWNFS
VSPNMSFING WLQRNLHPHS EFKNLREDRL KTADHTKSDF VWQGKLYGNI NSQNHWLQIK
LIGLPKNPQA IGAKVIMVTD HGQLLQQVGA MENSRYSQGY SPLHFGLGKN KRPKLIKIFW
NDGKFQEIQQ PEGDKLLIIK RESNL