| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0223 |
|---|
| Symbol | truA |
|---|
| ID | 8389527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 217687 |
|---|
| End bp | 218568 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644978269 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_003136027 |
|---|
| Protein GI | 257058139 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00472694 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.027676 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGGA CTCAAACCAA GGAAAAACAG CGCGTTGCTC TGGTCATTCA ATACCTGGGC
AGCCGTTTCC ATGGTTGGCA ATGGCAACCG AACCAGCGTA CCGTACAAGC CGAAATCGAA
AACGCGATCG CCGAAGTATT GGGAGAGACA GTGACCCTTC ATGGTGCAGG ACGAACGGAT
GCGGGAGTCC ATGCGGCAGC GCAAGTCGCC CATTTTGATA TGGTCAGTCC CATTCCGGCC
TCACGCTGGG TAGACATTCT CAATGCTCGC TTACCTGAAG ACATTTTGAT TCGAGGGTCA
GCACAGGTTC CATTGACTTG GCACGCCCGA TTTTCAGCCC AATGGCGACG CTATCGCTAT
ACCTTCTATA CCGAGCAGCG ACCTAACCTA TTTGTTAAGC CCTATAGTTG GCATTATTAC
CATTTTCCCC TGGATGAATC CCTGATGCAG CAAGCCTTAA ACCCCTTATT GGGAAGGCAC
CATTTAGCGG CGTTTCATCG TGCGGGGTCT CGACGAGATC ATTCCTGGGT TGAGGTTCAA
AGTACCCACT GTCACCGACA AGGCCCCTTT ATTCACCTGG AAATTCAGGC CAATGGATTC
TTGTATGGGA TGGTTCGGTT GTTGGTGGGA CTGTTAGTGG AAGTGGGCAG TGGCAAGCGA
TCGCTAGAAA ACTTTACGGA GATTTGGCGT AAGCAACAAC GGGAAGCCGT GAAATATGCG
GCTCCGGCCA AGGGGTTATG CCTGTTGCGG GTTGGTTATG AAGAGTTTCC CTTTCCTCCT
AGCCTTTGGT TTGATAGTCA ACCTCTATTC CTGTTCAATC AAGTGCTTGA TTCTTCGTTC
TCCTTCCCTA ATCAGAGTCT ACCCTATGGA ATGACTTCCT AA
|
|---|
| Protein sequence | MKGTQTKEKQ RVALVIQYLG SRFHGWQWQP NQRTVQAEIE NAIAEVLGET VTLHGAGRTD
AGVHAAAQVA HFDMVSPIPA SRWVDILNAR LPEDILIRGS AQVPLTWHAR FSAQWRRYRY
TFYTEQRPNL FVKPYSWHYY HFPLDESLMQ QALNPLLGRH HLAAFHRAGS RRDHSWVEVQ
STHCHRQGPF IHLEIQANGF LYGMVRLLVG LLVEVGSGKR SLENFTEIWR KQQREAVKYA
APAKGLCLLR VGYEEFPFPP SLWFDSQPLF LFNQVLDSSF SFPNQSLPYG MTS
|
|---|
| |