Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0217 |
Symbol | |
ID | 8389521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 212941 |
End bp | 214872 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644978263 |
Product | penicillin-binding protein, 1A family |
Protein accession | YP_003136021 |
Protein GI | 257058133 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.380595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00649941 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCGTCTA GCACTATCCG ACAACAACCC AAACCTCAAA AATCCCCGAA CCCTAAACCG TCCTTCGGTC AGGGTGTCAT CAAAGTAGCT GGAGGGACTG CCCTCGGCCT AGCCATGTTA GGCAGTTCCA TTATTGCCGG AGGACTGGTA GGACTAGCCA TTAGCTTTCG CAACCTCCCT GATGTCCGCA TTCTTAATAA CTATGCTCCC ACAGAAACCA GCTATATTTA CGATGTCAAG GGAAGACTGC TTTCAAGACT TCACGAAGAA GCCAACCGAG AAGTGGTTAG CATGGAGGAT ATTTCCCCTG ACCTCAAACG CGCGGTCTTA GCGATCGAAG ATAGCCATTT TTACTACCAC CATGGAATTA ATCCTACCAG TATTGGACGC GCTATCTGGG TTAACTACAG AAGTGGAGGT GTGGTGGAAG GGGCCTCGAC TATCACCATG CAGTTAGTCA AAAATATTTT TCTTTCCAAA GAACGAACTT TTAACCGTAA ACTCTCAGAA GCCGTTCTAG CCATTCGTGT CGAACAGGTG TTTGATAAAG ATAAAATCTT GGAAATGTAC CTCAATAACA TCTATTGGGG ACACAATAAC TACGGTGTTC AAACTGCTGC TGAAAGCTAT TTTAATAAAC CCGCTTCTAA ATTAACTTTA GCCGAATCTG CCTTAATGGC TGGACTGATT CAAGCCCCCG AAACCTATAG CCCTTTTACT AACTATACTA AATCTAAACA AAGACAAGCC GTTGTTTTAG ACCGCATGGC CGAAATTGGC TGGATAACAC CCCAAGAAGC CGAAGTCGCA AAAAATGCCC CTCTAAAAGT AGGTAAACCC ACCGCTTGGC AAGGAAGCAA ACTCCCCTAT GTGACGGATA CTGTCATGGA AGAGTTAGAA GCCAAGTTCG GCAAAGAAGC CACCCGCAAA GGGGGAATGC GAGTTCAAAC CACTGTCGAT TATTTTGCTC AAACCAAAGC CCAAGAAGTC GTAGAACAGG GCTACCGTAA CCTACGGGGA CGGGGTATCT ATGCTAGAAA TCTGCAAATC GCTTTGGTAG CTGTTGATCC TCGTACCCAT TTTATCAAAG CGATCGTCGG GGGGGTCGAT TACGAGAAAA GTCAATTAAA CCGCGCGACT CAATCCCGCC GTCAACCCGG GTCATCCTTT AAGTCTTTTG TTTACTATAC CGCCTTTGCC ACAGGAAGAT ATACCCCTGA ATCCGTGGTT AACGATAGTC CTGTTAGCTT CCGAGATGGT AGCGGTTTAT ATACCCCGAA AAACTACGGC GGAGGGTATA GCGGACCGAT GTCAATTCGG ACAGCTTTAA TTCAATCTCG CAACGTTCCG GCGGTGGTTA TCGGTAGAAA GGTTGGTGTA GATAAAGTCA TTGAAGTTTG TCGTCGTTTG GGGATTGACA GTCCTCTACA ACCAGTCACC TCCCTACCCT TGGGGGCGGG TGATATTACG CCTTTAGAAA TGGCGGCCGC CTATGCTACC TTTGCTAGTA ATGGTTGGCA TTCTGAACCC ACGATTATCC TACGGGTGAC GGACAGCCGA GGCAATGTTT TATTAGATAA TACCCCTAAA CCCCAATTAG TCCTTGATCC GTGGTCGGCT GCTAGTACAA CCTCAGTATT ACAAGGGGTG ATTACCAGTG GAACTGGAAG GGCTGCCAAT ATTGGTCGTC CGGCTGCGGG TAAAACGGGA ACGACTGACT CAGAACGGGA TGTTTGGTTT GTCGGCTATG TCCCTCAATT AGCCACGGCG GTTTGGATTG GGGATGATGC TAACCGAGTC CTGGGACGAG GAGTAACGGG AGGGGGTAAT GCTGCTCCCA TTTGGCGCAA TTTTATGCAG CAAGCCCTAA AAAGTGAACC CGTTAAACAC TTCCCCGCCG CTTCTAAATA CCCCCGTCCT AAGGCAAAAT AA
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Protein sequence | MSSSTIRQQP KPQKSPNPKP SFGQGVIKVA GGTALGLAML GSSIIAGGLV GLAISFRNLP DVRILNNYAP TETSYIYDVK GRLLSRLHEE ANREVVSMED ISPDLKRAVL AIEDSHFYYH HGINPTSIGR AIWVNYRSGG VVEGASTITM QLVKNIFLSK ERTFNRKLSE AVLAIRVEQV FDKDKILEMY LNNIYWGHNN YGVQTAAESY FNKPASKLTL AESALMAGLI QAPETYSPFT NYTKSKQRQA VVLDRMAEIG WITPQEAEVA KNAPLKVGKP TAWQGSKLPY VTDTVMEELE AKFGKEATRK GGMRVQTTVD YFAQTKAQEV VEQGYRNLRG RGIYARNLQI ALVAVDPRTH FIKAIVGGVD YEKSQLNRAT QSRRQPGSSF KSFVYYTAFA TGRYTPESVV NDSPVSFRDG SGLYTPKNYG GGYSGPMSIR TALIQSRNVP AVVIGRKVGV DKVIEVCRRL GIDSPLQPVT SLPLGAGDIT PLEMAAAYAT FASNGWHSEP TIILRVTDSR GNVLLDNTPK PQLVLDPWSA ASTTSVLQGV ITSGTGRAAN IGRPAAGKTG TTDSERDVWF VGYVPQLATA VWIGDDANRV LGRGVTGGGN AAPIWRNFMQ QALKSEPVKH FPAASKYPRP KAK
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