Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0172 |
Symbol | |
ID | 8389475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 171782 |
End bp | 173041 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644978217 |
Product | diguanylate phosphodiesterase with GAF sensor(s) |
Protein accession | YP_003135976 |
Protein GI | 257058088 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0212595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.381945 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC TTTGTACTAC CCCATCTCTG GCAACCCTAT TCAGGGAAGG CGTTTTTGGA CAGCCGGGAA GCTCCCTCCA AAGTCGTTTT GCGCGGTTGC TAGGTGCTCT GCGAACCCAT CTTTGCATGG ATTTCGCCTT TATCTCAGAG TTCGCGCTAG GGCAACGCAT CTTTCGCTCG GTAGATTCAG GTCAAGCAAC TTCTCCTATT CACGTCGGAG AATCAGACCC TCTCGAGGAA AGCTATTGTC AGTGGGTGGT AGATGGCCGT TTGCCGGAAC TTATCCCCGA TGCTACCCAA AACGTGATGG CACTCCGCAT CCCCGCCACT ACCGAATTGC CCGTTGGTGC ACACCTGAGT GTGCCCATCA GACTAAGCAA TGGCCAAATT TATGGGACGC TTTGCTGTTT CAGTTATATT CCCAACCATA CGCTGACGGA GCGCGATCTT AACTTGATGC GGGCTATGGT TGAAGTTGTG GCGTATATGA TTGAGGAAGA CCGCCTAGAC AGGCAGGAAA AAATCAAGGT AGAGGACAAA ATTAAGGCCG TACTCTCGGG AGACGTGCTT TCCATCGTCT ATCAACCCAT CTACCACTTC ATACAACGCA GAATTGTTGG GTTTGAAGCC CTCGCCCGCT TTAACACCAC GCCTAGGCAC TCCCCAGACC AGTGGTTTAG CGAAGCCGCC AAGGTTGGAC TAGGCATTGA ACTTGAACTC CTAGCCGTGG AGCTTGGGCT AAAAGGCCTC GATCACTTGC CCGAAGAGAT CTATATCTCC GTCAACGTTG CGCCAGAGAC GATACTTCAT CATAGTTTCT CACACGCCAT CAGCCGCTGG CCGTTACAAC GTGTTGTGCT GGAGGTGACA GAGCACGCCG TCACCTCCAA ATATGCCGAT ATCGCACAGG CACTGGCGTT TCTCAAACAG CACGGCTTAC GGCTCGCGGT GGACGATGCA GGTGCTGGCT ATGCCAGCTT CCGGCACATT CTAAGCCTCT CACCTGACAT CATAAAACTA GATATGAGCC TCACCCAAAA CATTGATACG GACGCGTCGC GCCGTGCCTT AGCCATTGCC CTGATTGGAT TCGCTAACGC TACCGGCAGT AGAATTGTGG CAGAGGGGGT TGAGCGTGAG GAGGAGTTGG TGGAATTGCG TGCGTTAGGC GTTAGCAAGG CGCAAGGCTA TTACATTGGC AAGCCCATGC CGCTTGAGAG GGCACTGGAG GTGGCAATGC TGGGAAGACA GCTTTTGTAG
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Protein sequence | MTTLCTTPSL ATLFREGVFG QPGSSLQSRF ARLLGALRTH LCMDFAFISE FALGQRIFRS VDSGQATSPI HVGESDPLEE SYCQWVVDGR LPELIPDATQ NVMALRIPAT TELPVGAHLS VPIRLSNGQI YGTLCCFSYI PNHTLTERDL NLMRAMVEVV AYMIEEDRLD RQEKIKVEDK IKAVLSGDVL SIVYQPIYHF IQRRIVGFEA LARFNTTPRH SPDQWFSEAA KVGLGIELEL LAVELGLKGL DHLPEEIYIS VNVAPETILH HSFSHAISRW PLQRVVLEVT EHAVTSKYAD IAQALAFLKQ HGLRLAVDDA GAGYASFRHI LSLSPDIIKL DMSLTQNIDT DASRRALAIA LIGFANATGS RIVAEGVERE EELVELRALG VSKAQGYYIG KPMPLERALE VAMLGRQLL
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