| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0095 |
|---|
| Symbol | |
|---|
| ID | 8389398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 100360 |
|---|
| End bp | 101967 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644978142 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_003135901 |
|---|
| Protein GI | 257058013 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.693174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTTA AAGAACTTTT AAAAATTCAG AAAACCACTC AAGAGAAATT GAGAAAACCC
CGAAAACAGT TACGATGTTG TACCGCGGCG GGTTGTCTTT CTTCTGGTTC TCAAGCTGTT
CTGAATCGGT TAAAAACAGC TATTAAAGAA GGCAATTTAG AAAATCAAGT CGAAATTAGC
AGCGTTGGCT GTTTAAGGTT ATGCAGTCAA GGACCCTTAG TAGAAATTGA TCCCGACAAA
ACTTTATATC AACAGGTTAC TCCTGAACAA GCTTTGGCAA TTATTGATAC CCTGAATGGG
GTTGAACCCC GTCAAGAATT ACCCGAAAAA GGCGATCTAA ACCATCCCTT TTTTGCCCGT
CAATTCCCCA TTGTTTTAGA AAATAGCGGT CAAATTGATC CCGAAAGTAT TGAAGAATAT
ATTAGTCGGG GAGGGTATCA ACAATTACAC CAAGTTTTGT TAGAAATGAC CCCCAATAAA
GTCATCGAAG AAGTGACAAA AAGTGGACTA CGGGGACGGG GAGGGGGAGG CTATCCCACG
GGGGTAAAAT GGGCAACCGT TGCTAAGATG CCAACACAAC AAAAATACGT TATTTGTAAT
GCTGATGAAG GAGATCCAGG TGCTTTTATG GATCGGGCAA TTTTAGAAAG TGATCCCCAT
CGGGTTTTAG AAGGAATGGC TATTGCTGGT TATGCCGTGG GAGCAAATCA TGGATATATT
TATATTCGGG CTGAATATCC TTTAGCCATT CAACGCTTAG AAAAAGCCAT TCAACAAGCC
AAAAAATACG GATTAATGGG GGTACAAATC TTTGACTCTC CCTTTGACTT TAAAATTGAT
ATTCGGGTCG GTGCAGGGGC ATTTGTGTGT GGGGAGGAAA CCGCTTTAAT GGCCTCAGTA
GAAGGCAAAC GAGGCACACC CCATCCTCGT CCCCCCTATC CAGCCGAGTC AGGACTGTGG
GGACATCCGA CGTTAATTAA CAATGTTGAA ACCTATGCCA ATATTGTCCC CATTATTCGA
GAAGGAGGGA ACTGGTATGC CAGCATTGGA ACAGAAAAAA GCAAGGGAAC CAAGGTCTTT
GCCTTAACGG GAAAAGTCAA AAATATTGGC TTAATAGAAG TCCCCATGGG AACCACTATT
CGGGAAATTG TTGAAGAAAT TGGCGGGGGT GTTTCTGACG GAGAAAAAGT CAAAGCCGTG
CAAACCGGAG GACCTTCTGG GGGATGTATT CCTGAATATT TATTTGACAC CCCGGTTGAA
TATGACTCCC TACAAAAGTT AGGGACAATT ATGGGATCAG GGGGCATGAT CGTCATGGAT
GAAAGCACTA GCATGGTCGA AATTTCGCGC TTTTATATGG AATTTTGTCG TGAAGAAAGC
TGCGGAAAAT GCGTTCCTTG TCGCACAGGA ACGGTGCAAT TGTATAACCT ATTAACAAAA
TTAGTAGAGG GACAAGCTAA TAACAGAGAT TTAGCCCAAT TGGAGGCTTT ATGTCAAATG
GTCAAAGAAA CCAGCTTATG CGGGTTAGGC ATGACAGCCC CTAACCCCGT TTTGAGTACC
CTACACTATT TTCGAGATGA ATATTTAGCG TTAATTCAAT CAAAATAA
|
|---|
| Protein sequence | MNLKELLKIQ KTTQEKLRKP RKQLRCCTAA GCLSSGSQAV LNRLKTAIKE GNLENQVEIS
SVGCLRLCSQ GPLVEIDPDK TLYQQVTPEQ ALAIIDTLNG VEPRQELPEK GDLNHPFFAR
QFPIVLENSG QIDPESIEEY ISRGGYQQLH QVLLEMTPNK VIEEVTKSGL RGRGGGGYPT
GVKWATVAKM PTQQKYVICN ADEGDPGAFM DRAILESDPH RVLEGMAIAG YAVGANHGYI
YIRAEYPLAI QRLEKAIQQA KKYGLMGVQI FDSPFDFKID IRVGAGAFVC GEETALMASV
EGKRGTPHPR PPYPAESGLW GHPTLINNVE TYANIVPIIR EGGNWYASIG TEKSKGTKVF
ALTGKVKNIG LIEVPMGTTI REIVEEIGGG VSDGEKVKAV QTGGPSGGCI PEYLFDTPVE
YDSLQKLGTI MGSGGMIVMD ESTSMVEISR FYMEFCREES CGKCVPCRTG TVQLYNLLTK
LVEGQANNRD LAQLEALCQM VKETSLCGLG MTAPNPVLST LHYFRDEYLA LIQSK
|
|---|
| |