Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0050 |
Symbol | |
ID | 8389353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 53319 |
End bp | 54056 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644978098 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003135857 |
Protein GI | 257057969 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.795595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTG TTGTTATCAT TACGGGAGTA GCAGGAGGAA TTGGCTATGC AACGGCGCAA TATTTTGCCA GTCAAGGCTG GTCAGTCATT GGGGTTGATT GTCAAGAAAT AACCCAATTG ATGGATATTG ATCATTACGT TAAAGCGGAT CTCTGCGATG CTGATCAAAT TGACGCTATC ACTGAGAAAC TTGATAGACT TGATGGGTTG GTTAATAATG CAGCCGTACA AATTTGTAAA CCGATCATCG AGATGGATGT GACTGAATGG GACCAAGTGA TGGCAGTCAA TTTACGTTCA GCTTTCTTGT TGTCTAAAGC TGCCTATCCT TTGTTAAAAG TCAGTCAAGG AAGTGTGGTG AATGTGAGTT CTGTTCATGC GATCGCCACT TCTGGGAATA TTGCTGCTTA TGCAGCTAGT AAGGGGGGTT TAGCAGCATT TAGTCGCGCT TTAGCCATTG AATGGGCTAA CGATCAAATC CGTGTCAATG CTATTTTACC AGGGGCGGTG GACACACCGA TGTTGCACGC GGGCTTAACC AGGGGCCATC TTTCGGGCAA TAATGTCAAT GAGTTGATGA ATCAATTAGC CGCAAAAACC GTCATTGGGA GGGTGGGAAA ACCAGATGAA ATAGCTAAAG GAATTTTCTT TTTAGCCAAC AAAGAATTGT CGTCATTTAT AACCGGTCAA ACCTTGGTTA TAGATGGAGG GGCAACCATT AGATTAAGCA CAGAATAA
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Protein sequence | MKPVVIITGV AGGIGYATAQ YFASQGWSVI GVDCQEITQL MDIDHYVKAD LCDADQIDAI TEKLDRLDGL VNNAAVQICK PIIEMDVTEW DQVMAVNLRS AFLLSKAAYP LLKVSQGSVV NVSSVHAIAT SGNIAAYAAS KGGLAAFSRA LAIEWANDQI RVNAILPGAV DTPMLHAGLT RGHLSGNNVN ELMNQLAAKT VIGRVGKPDE IAKGIFFLAN KELSSFITGQ TLVIDGGATI RLSTE
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