Gene Cyan8802_4562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_4562 
Symbol 
ID8366380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013160 
Strand
Start bp51316 
End bp54060 
Gene Length2745 bp 
Protein Length914 aa 
Translation table11 
GC content30% 
IMG OID644978033 
ProductCRISPR-associated helicase Cas3 
Protein accessionYP_003135792 
Protein GI256818725 
COG category[R] General function prediction only 
COG ID[COG1203] Predicted helicases 
TIGRFAM ID[TIGR01587] CRISPR-associated helicase Cas3 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAC GTTATGATTT TGGTCGTCTA TTTTTTCCGG AAAGTCATGA AGACTCTCTT 
TCTGATGTAA TTCTATTTCA ACCGTTAGGT AATCATGTTA GTAACGTTAG ATTTTTAGTC
AATAAGTGGC AATTTCCTAA AGTTTCTAAA TTATCTCGTA AAAGAATTTC TAAAAGTGCA
GGTTTACATG ATATTGGCAA ACCTCAAAAG TTTTCTATAA AAGTTGACTT TAAAAAAGGA
AAACCTCAAT TAACTTATTC TTTTTCAGGA CATCGTTTTT TAGCTGAATG TCCTAATGAT
CCTTGGGTAG AAAAATTAGC CAGAGGACAT CATGATTATT CAGTTCATGA TATTTGTCGA
GATACCTATA TCCTAAAAAA TCTAATTAAT GGATTAGATG AAAATAACCC TTTATTTAAA
GTAGCCAGCA GTTACTATCA AGACCTATCA GTCGATTCAC TTATCTATGC ACAAGAACTA
TATATTTTAG AAATGTGTGA TCAAATAGAG GCTGAAATTG CTTGTCGTTT TTATGAAGAT
GATGACCAAG CAGAATCTCG CGCTTTTATG GATTTTAACA TTACTTCTGA TTCAGATAAC
AAAAATATTT TTTATATAGA ACCTTGGATT TTTGAAGAAG ATAAAATTAA ATTGACTTTA
GCTACTTGGT CAATGAATAT TCCTCAAGAA CTCAAGGATA AAATTCAAAA TAGTTCGGAA
GAAGATAAAC AAAAGCTTAC TCAAGACTTA CAATCATCCA TTAAAAATTG GTGGAAAAGT
CAACCAAAAA AGTTAAGAGC AAAGACAAAT AAAGTTATTC TTAAGCCCCT ACTCAGTGAA
AGATTAGAAA AGTTTAATGC AACTCAATTA TATCAAAAAT TGAAAGGATT TACACCTAAT
CCAATGCAAG AAAAGCTAAT TAATGCTTTA AATCCAGAAA TTAATCCTAG TCCATCATGT
CTATTAAAAG CCCCTACAGG ATCAGGAAAA CTAGAGGCAA TTTTAATACC TAGTTTAGCT
TATGATTATA AACTAATTTT AGTTTTGCCT ACTAAAAGTT TATTAGAAGA CCATCGACAA
CGAATAGATT CATATTTATT AAAGTTTTCT GAACTTCCAT CTAATCAAGA TCGAGATATA
TCTCTAGTGA TTGATACTGG GACAAAAATG ACTCGATATA TTTATAAAAA TGGGTCTATG
CGTCTTCCTG AAAATACTCC CCGTCGTCAT TTATATAAAG GAAATATTAT TCTTACGACT
CTCGATAAAT TTATGTATCG CTATTTTTCC TTTGGAGATA AGCAAAAATC ATTTATATTT
CCTTATCGAA TTCATCAAGA TAACACTTTA ATTTGCTTTG ATGAAGCTCA TAGTTATGAT
GATATCTCAT TTACTAACTT TTGCAGTCTG ATTAAAGCTT TATATGAAGC AGGGCGATCG
CTTATTTTAA TGACGGCAAC TTTATCTCAT AAGCATTTAG AAAGATTTGA CTATCTTCAG
GATGATTTGA TTGATTATAT AGACGATGCA GACAATTTAC AAAAGTTGTA TAAATTTTCA
CAACAGATAT TAAAACAACA ATTTGTTAAT CAAAAACACT TTGAATGGAT TCAAGATGTT
GAGCATAATT CAGAATCCCC TGAAACATTC CACAACGCAT TTACTCAAAG AGTTTTAAAT
GAATGGCAAT CTAATTCTAA TCAGAGAATA ATCGCTACTG TTGAGACAGT TAAAGATGCT
GTTGTCATTT ACGAGAAAAT TAAAAGCATA TTAGAAACAA ATAAGGATAG TCAAGGTCGA
TTTTTATTCC TTTATCATGG ACGAATTTCT GATATTCCCA AAGACTCAGA ATTTTCCCGA
ACAAACATCT ATCAACAAAT TAAAGCAAGA GATGAGAAAA ATCAACCTTA TATTTTAGTT
ACCACCAGTG CTATAGAAGT TGGTTGCGAT CTAAATAGTA CAAAATTGAT CACTCAATTC
TGTAATCCTG AGAACCTTAT TCAGAGGGGA GGGCGTTGTA ATAGAAAAGG AGATATTAAG
GGTGCTAAAA TTATTGTAAT TGGCAAAAAT ATCCCTGAAT TTGCTAATAC CTTAAGTGAA
TTTGAGCTTA AAAACTATCA ATTAGTTCTT CAGAACCTAA ATAATAAAAA TTTCGATACT
AAGACTATTA TGAATTGCGT CTCTAGTAAA CAGCAAGTTG ATGATTATCG AGTAGTAGAA
CTTTTTTCTA TGTTACATGA TTATGTCTAT AACGCTGATT TAACTTGTCA ACCTTCTCAT
GAAAAAGGAT TAGTTATAAC TCGTAGTTGG ACTCCTTCAG TGACTCTTGT TTATGATAAC
GGGAAGAACA GAGATAAAAT GAATGAAATG CCTCAAATTA CTGTTCCTAT TAATAGGTTA
GTGATCAAAA AAAATAAAGA GACAGATGAA AGTAATGAAT ATAATAACAT TGATGTTTAT
GAATACATAT ACAATAAGGA AGAAACTCGA TGGAAATTAG AACCCTTAAA ATATTGGGGA
CAAGCCTATA AAAAAGATAT TGTTATAATT ATTAAAGAAG AACATAAAGA AGCAAGTTAT
GGAACCTCTC AACCCTATGA ATATGATCCA GAATTAGGCT TTGTAAAATT GCCTGGTGTT
TTTATAAAAT GGAAATCAAT CGACAATGAA GAAAGACTCC AATATAAAAC ATCAGAAAAC
AAATCTGTTG TTATTACTTA TATTAAACCA TTATCAAACA ATTAA
 
Protein sequence
MSKRYDFGRL FFPESHEDSL SDVILFQPLG NHVSNVRFLV NKWQFPKVSK LSRKRISKSA 
GLHDIGKPQK FSIKVDFKKG KPQLTYSFSG HRFLAECPND PWVEKLARGH HDYSVHDICR
DTYILKNLIN GLDENNPLFK VASSYYQDLS VDSLIYAQEL YILEMCDQIE AEIACRFYED
DDQAESRAFM DFNITSDSDN KNIFYIEPWI FEEDKIKLTL ATWSMNIPQE LKDKIQNSSE
EDKQKLTQDL QSSIKNWWKS QPKKLRAKTN KVILKPLLSE RLEKFNATQL YQKLKGFTPN
PMQEKLINAL NPEINPSPSC LLKAPTGSGK LEAILIPSLA YDYKLILVLP TKSLLEDHRQ
RIDSYLLKFS ELPSNQDRDI SLVIDTGTKM TRYIYKNGSM RLPENTPRRH LYKGNIILTT
LDKFMYRYFS FGDKQKSFIF PYRIHQDNTL ICFDEAHSYD DISFTNFCSL IKALYEAGRS
LILMTATLSH KHLERFDYLQ DDLIDYIDDA DNLQKLYKFS QQILKQQFVN QKHFEWIQDV
EHNSESPETF HNAFTQRVLN EWQSNSNQRI IATVETVKDA VVIYEKIKSI LETNKDSQGR
FLFLYHGRIS DIPKDSEFSR TNIYQQIKAR DEKNQPYILV TTSAIEVGCD LNSTKLITQF
CNPENLIQRG GRCNRKGDIK GAKIIVIGKN IPEFANTLSE FELKNYQLVL QNLNNKNFDT
KTIMNCVSSK QQVDDYRVVE LFSMLHDYVY NADLTCQPSH EKGLVITRSW TPSVTLVYDN
GKNRDKMNEM PQITVPINRL VIKKNKETDE SNEYNNIDVY EYIYNKEETR WKLEPLKYWG
QAYKKDIVII IKEEHKEASY GTSQPYEYDP ELGFVKLPGV FIKWKSIDNE ERLQYKTSEN
KSVVITYIKP LSNN