| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39770 |
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| Symbol | |
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| ID | 8389298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4306003 |
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| End bp | 4307043 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644977986 |
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| Product | preprotein translocase subunit YidC |
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| Protein accession | YP_003135745 |
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| Protein GI | 257057913 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00795721 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.66233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGACT TCATCTACTA CCCTGTGTCG TTCATCCTCT GGGTGTGGCA CAAGGTCTTC
GGTTTCGTCT TCGGTGAAGA CAACGCCATT GCCTGGGTCC TGGGGATCGT CTTCCTGACC
TTCACGGTGC GCGGACTGCT GTTCAAGCCG TTCGTGAACC AGGTGCGGTC GATGCGGAAG
ATGCAGGACT TCGCACCCGA GGTCAAGAGG ATCCAGAAGA AGTACGCCAA CGACCGGCAG
CGCCAGGCGA TGGAGTTGCA GCGGCTCCAG CGCGAGCATG GGGTCAACCC CTTCGGTAGC
TGTCTACCGA TATTGCTGCA GATCCCGGTC TTCATCGGCC TGAACTGGGT GTTGCGTAAC
TTCCGGCCCG GTGCCGAGTC GAACTACTTC TTCGACGCCG ATGACGTCGC TTCCTACGTC
GACGCGCAGA TCTTCGGCAT CAACCTCGGT GACGCGATCA ACCACCTGGG TCTCGCCGGT
GGTGGAGGAG ACAGTGGCTG GAACTGGGAT GTCGCGCCAC TGGCCGTGCC GTTGATGATC
GTGGCCGGTA TCGCCACGCA CCTGACCGCG CGTCACTCGG TGGCCCGCCA GAACCCGGCG
TCGGCGACCC CGCAGACCGC GGTGATGAAC AGGCTGACGC TGTACGTCTT TCCGGCCGGT
GTGGTGGTCT TCGGTGCCTT CTTCCCCATC GGCCTGTTGA TCTACTGGCT CGCGAACAAC
GTCTGGACGC TGGGCCAGCA GCGCTTCGTC TACAAGAAGA TCGACAAGGA AGAGGAAGCC
AAGAGGCAGG CCGCCAAGGA GAAGCGCGAC AGCCTCGCGC CGAAGCCCGG TCAGAAGCCT
CAGGTCGGCC AGAAGCCCAA GCCGGGACAG AAGCCCGCGC AGAAGTCGGC CCCGAAGCAG
CAGAACCAGA GCCACAACAC CAAGAACGGT AAGTCCCCGA AGGGTAGCGG CAGCAGCGTC
CGGGGTGGCG CCTGGGCGAA GAACGGCGGG AACCGACCCG CGAACCAGGG CAAGAAGACG
CAGGGGCGCA AGCGGCGCTG A
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| Protein sequence | MLDFIYYPVS FILWVWHKVF GFVFGEDNAI AWVLGIVFLT FTVRGLLFKP FVNQVRSMRK
MQDFAPEVKR IQKKYANDRQ RQAMELQRLQ REHGVNPFGS CLPILLQIPV FIGLNWVLRN
FRPGAESNYF FDADDVASYV DAQIFGINLG DAINHLGLAG GGGDSGWNWD VAPLAVPLMI
VAGIATHLTA RHSVARQNPA SATPQTAVMN RLTLYVFPAG VVVFGAFFPI GLLIYWLANN
VWTLGQQRFV YKKIDKEEEA KRQAAKEKRD SLAPKPGQKP QVGQKPKPGQ KPAQKSAPKQ
QNQSHNTKNG KSPKGSGSSV RGGAWAKNGG NRPANQGKKT QGRKRR
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