Gene Svir_39680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_39680 
Symbol 
ID8389289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4297433 
End bp4297759 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content64% 
IMG OID644977977 
Productthioredoxin 
Protein accessionYP_003135736 
Protein GI257057904 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.333633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA CCGTTGAGGT GACCGACTCG AACTTCGCCG ACGAGGTGCT GGCGCACGAC 
AAGCCGGTCC TCGTGGATTT CTGGGCGACT TGGTGCGGGC CGTGCAAGAT GATCGCGCCG
GTGCTGGAGG AGATCGCCGC CGAGCACGGG GACAAGCTGC GGGTCGCGAA GCTCGACACC
GACGCCAACC CCAACACGAC CAGGGACTAC CAGGTCATGT CGATCCCGAC CATGATCCTG
TTCCAGGACG GCAAGCCGGT GAAGCAGATC GTCGGTGCCA AGCCGAAGGC GGCGTTGCTG
AACGACCTCG CCGACGTGTT GCAGTAA
 
Protein sequence
MTNTVEVTDS NFADEVLAHD KPVLVDFWAT WCGPCKMIAP VLEEIAAEHG DKLRVAKLDT 
DANPNTTRDY QVMSIPTMIL FQDGKPVKQI VGAKPKAALL NDLADVLQ