| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39630 |
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| Symbol | |
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| ID | 8389284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4291352 |
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| End bp | 4293184 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977972 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_003135731 |
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| Protein GI | 257057899 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.783158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.312957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCCGT GGCGGCAGGA GGAACAACGG CGCAAGCCGG CACCGCCGAA GGACACCGAA
CGCACGATCT TCATCCCGCG GGAGGCGGGC GTGCCGCCGG GCGTGCGCTG GCCCGCGGCC
GACCCGGACG TGCTGCGCCC TTACGACGAG CTCGCGACGC GGATGATGCC GCGCATCTCC
GCCGAGCCGA TCGGGGAGCG GCTGCCGGAG GTCCAGCTCG CCCCACCGAA GGAAGACGAG
AAGAAGGGGC CTTCGCTGGC CAAGGCCAGC GGTCGCATGG CCATCGCCAC GCTGACCAGC
CGGATCACCG GTTTCGCGTG GAAGGTCATG CTCGCGTGGG TCGCGACCCT CGGCGTGCTC
TACGACTCCT TCACCGTCGC CAACACCCTG CCGTTGATCA TCAACGAGCT GTTGCTCGGC
GGTGTGCTCA CCAGTGTGGT CGTGCCGCTG CTGGTGCGTT CACAGGACGA CGAGGACGGC
GGCGAGGCCT ACACGCAGAG ACTGCTGACC CTCGCCATCA CCGTGCTCGG CATCGGCACG
GTGGTCTCCA CGGCGTGTGC GCCGTGGCTC ACCGGGCTGT TGATGGACGA CAGCGGGGAC
GCGAACCCGC AACTGGCCAC GTGGTTCGCC TACCTGCTGC TTCCCGGCCT GTTGTTCTAC
GGGCTGTTCG CCGTGCTGTC GGCCATCCTC AACGCCAAGC AGATCTTCGG CCCCGCACAG
TGGGCGCCGG TCATCAACAA CCTGGTCATC TTCGCCACGA TCGCCGCGTT CGCCCTGGTT
CCCGGCGATC CGACCATCGT GCCGACCCGC ATGAGCGACC CGCAGGTCCT GGTGCTGGGG
ATCGGCGTGC TCACGGCGAT GGTGGCGCAG GCGATGTTCC TCGTGCCCCC GCTCCTCCGC
TCGGGTTTCA AGTTCAAGTG GCGGTTCGGC ATCGACGAGC GGCTCAAGGA GTTCGGCGGA
CTCGCCGCGT GGGTTCTCGG CTACGTCGCC GTCAGCCAGA TCGGCATGGT GGTGAACACC
CGGGTCCTCA CGGGCGGCGC GGCCGGTGGA CCGTCGATCT ACTCGAACGC CTGGCTGTTG
TTCCAGCTGC CGTACGGCGT CATCGGGGTC TCGCTGCTGA CCGCGTTGAT GCCCAAGATG
AGCAGGGCCG CAGCCGACGG CGATCACCGC AAGCTCGTCA GTGACCTGTC GTACGGCTCA
CGGATCACCA CGATCATGCT GATGCCGGTC TCCGCTGTGA TGGCGGTGGC GGGGCAGTCC
ATCGGTGTGG CCCTGTTCGC GTTCGGCAAG GGCTCGGTCG AGGACGCCGA GCGGCTGGGA
CAGGCGCTGG CGGTGTCGGC GTTCGGACTG GTGCCGTACG CGCTGGTGAT GCTTCAGATG
CGCGTGTTCT ACGCGATGAA GGACTCGCGC ACGCCGACAC TGATCATGTG CGTGATGACG
GCGGTCAAGA TCCCGCTGTT GTACCTCGCC TCGGCCGTTT TGGAACCGAC CCACGTGGTG
CTCGGCGTGA TGCTGGTGAA CTCGCTGGTC TTCGTGGTGG GCGCCGTCAT GGGTCAGGTG
TGGCTGTGGG TGAAGCTCGG CAACCTGCGG AGCAAGCGCG TGCTCGGCGT GATCCTGTTC
ACCGTGATCG CGAGCGGTCT CGGGGCTTTG GCGGCCGCGC TGGTGGGCGC GGTGATCCCG
GACTTCCTCG GCTCCGTCGG TAAGGCGTGG GCGACGCTGA TCTGCCAGGG CATCGTGGGC
ATCGCGGTGT CGTTCGGTGT GCTGATCGCT TTGAAGGTGG ACGAACTGGC GCCCGTGACC
CGCCGAATAG CTGGTTTGCT CCGACGTGGG TAA
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| Protein sequence | MRPWRQEEQR RKPAPPKDTE RTIFIPREAG VPPGVRWPAA DPDVLRPYDE LATRMMPRIS
AEPIGERLPE VQLAPPKEDE KKGPSLAKAS GRMAIATLTS RITGFAWKVM LAWVATLGVL
YDSFTVANTL PLIINELLLG GVLTSVVVPL LVRSQDDEDG GEAYTQRLLT LAITVLGIGT
VVSTACAPWL TGLLMDDSGD ANPQLATWFA YLLLPGLLFY GLFAVLSAIL NAKQIFGPAQ
WAPVINNLVI FATIAAFALV PGDPTIVPTR MSDPQVLVLG IGVLTAMVAQ AMFLVPPLLR
SGFKFKWRFG IDERLKEFGG LAAWVLGYVA VSQIGMVVNT RVLTGGAAGG PSIYSNAWLL
FQLPYGVIGV SLLTALMPKM SRAAADGDHR KLVSDLSYGS RITTIMLMPV SAVMAVAGQS
IGVALFAFGK GSVEDAERLG QALAVSAFGL VPYALVMLQM RVFYAMKDSR TPTLIMCVMT
AVKIPLLYLA SAVLEPTHVV LGVMLVNSLV FVVGAVMGQV WLWVKLGNLR SKRVLGVILF
TVIASGLGAL AAALVGAVIP DFLGSVGKAW ATLICQGIVG IAVSFGVLIA LKVDELAPVT
RRIAGLLRRG
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