Gene Svir_39600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_39600 
Symbol 
ID8389281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4286416 
End bp4287987 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content68% 
IMG OID644977969 
ProducttRNA adenylyltransferase 
Protein accessionYP_003135728 
Protein GI257057896 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR02692] tRNA adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAGC GCAACACTGA AGCAGCCACA AAACGGCGGC TGACAGCGGC GAAACGCAAC 
GCTGTCGCCG AGCTGATGCG TGTTTCGCCG ATCGCCGACG AACTCGCCGC ACGGTTCTCA
CGTGCTGGTC ACCGCCTGTA TCTCGTGGGC GGGAGTGTGC GGGACGCTTT GCTCGGCAAG
CTGTCCACGG ATCTGGACTT CACCACCGAC GCGCGACCGG AACAGATCCA GCGCATCGTC
TCCGGCTGGG CCGAAGCCGT GTGGGACACC GGTATCGAGT TCGGGACCGT CGGCGTGGCG
AAGCACGGCA CGACGTGCGA GATCACCACG TTCCGGGCCG ACCGCTACGA CCGGGTCGGG
CGGCACCCCG AGGTCGAGTT CGGTGATTCC ATCGAAAGTG ACCTGGTCCG TCGGGATTTC
ACGGTCAACG CCATGGCCGT CGACCTGGCT ACCAAGTCGT TCGTCGACCC ACACAACGGG
TTGGAGGCGT TGGCTCGGCG CACGCTCGAC ACCCCGGCCA CGCCGGAGGA GTCCTTCGCC
GACGACCCCC TGCGCATGTT GCGGGCCGCG CGATTCGTCT CCCAGCTCGG CTTCGAGCCC
GAGCCGAGGG TCGTGCGGGC CATGACCGAC ATGGCCGACG AGATCAAGCG CATCACGGCG
GAGCGGGTGC AGGCCGAGCT GTCGAAGCTC ATCCTCGGGA GCGCGCCGCG GAAGGGTATC
GAGCTGATGG TGGACACGGG CCTGGCCGAC CACGTGCTGC CCGAGGTGCC GGGGATGCGC
CTGGCCATCG ACGAGCATCA TCAGCACAAG GACGTCTACC AGCACTCGTT GAAGGTGCTG
GAACAGGCGA TCGACCTGGA GACCGCGCAC GAGCCGAGGT TGGAACCCGA TCTCGTGTTG
CGGCTGGCGG CGCTGTTGCA CGACATCGGC AAGCCCGCGA CGCGGCGGTT CGAACCGGGC
GGGGGCGTGA GCTTCCACCA CCACGAGGTG GTGGGCGCCA AAATGGCGCG CAAGCGTTTG
CGTGCCCTGC GGTACCCGAA GGACGTCGTC AACGACGTGT CCCAACTGGT GTTCCTGCAC
CTGCGGTTCC ACGGCTACGG CCGGGGTGAG TGGACCGACT CGGCCGTGCG CCGGTACGTC
ACCGACGCGG GGCCGTTGCT GCCGAAGCTG CACAAACTCG TCCGCGCCGA CTGCACCACC
CGCAACAAGC GCAAGGCCGC CGCGTTGCAG CGCGCCTACG ACGACCTCGA ACAGCGCATC
GAGCGGATCG CGAAGGAGGA GGACCTCGCG AAGGTCCGGC CCGACCTCGA CGGCAACGAG
ATCATGCGCA TCCTCGGGGT CGAACCGGGG CCGATCGTCG GGAAGGCGTG GAAGCACCTG
AAGGAACTGC GGCTCGACCG GGGGCCGCTC GGCCGTGACG AGGCGGTGGC CGAACTGCTC
CGATGGGCCG CCGAGCAGGG GATCGAGGTG CCCGAGTCCA ACGTTTCGGA CTCGTCGGAG
CCCGCGGAGT CTTCGGAATC GGCTTCGGGG GACTCGGGTG CCGAGGAGGG GGGCACCGAC
TCCGGGAAGT AG
 
Protein sequence
MNERNTEAAT KRRLTAAKRN AVAELMRVSP IADELAARFS RAGHRLYLVG GSVRDALLGK 
LSTDLDFTTD ARPEQIQRIV SGWAEAVWDT GIEFGTVGVA KHGTTCEITT FRADRYDRVG
RHPEVEFGDS IESDLVRRDF TVNAMAVDLA TKSFVDPHNG LEALARRTLD TPATPEESFA
DDPLRMLRAA RFVSQLGFEP EPRVVRAMTD MADEIKRITA ERVQAELSKL ILGSAPRKGI
ELMVDTGLAD HVLPEVPGMR LAIDEHHQHK DVYQHSLKVL EQAIDLETAH EPRLEPDLVL
RLAALLHDIG KPATRRFEPG GGVSFHHHEV VGAKMARKRL RALRYPKDVV NDVSQLVFLH
LRFHGYGRGE WTDSAVRRYV TDAGPLLPKL HKLVRADCTT RNKRKAAALQ RAYDDLEQRI
ERIAKEEDLA KVRPDLDGNE IMRILGVEPG PIVGKAWKHL KELRLDRGPL GRDEAVAELL
RWAAEQGIEV PESNVSDSSE PAESSESASG DSGAEEGGTD SGK